lpxH:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''lpxH'' | ''lpxH'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK0517, b0524, JW0513, ybbF''<ref name='LIB:Riley_2006'/> | ''ECK0517, b0524, JW0513, ybbF''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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EG12666<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | EG12666<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Lipid A biosynthesis, UDP-2,3-diacylglucosamine pyrophosphatase<ref name='LIB:EcoGene'/> | Lipid A biosynthesis, UDP-2,3-diacylglucosamine pyrophosphatase<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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UDP-2,3-diacylglucosamine pyrophosphatase<ref name='LIB:Riley_2006'/>, B0524<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbbF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, LpxH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | UDP-2,3-diacylglucosamine pyrophosphatase<ref name='LIB:Riley_2006'/>, B0524<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbbF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, LpxH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0008758 UDP-2,3-diacylglucosamine hydrolase activity ([http://www.geneontology.org/GO.evidence.shtml IDA,IMP]) | |||
'''Biological Process''' | |||
* GO:0009245 lipid A biosynthetic process ([http://www.geneontology.org/GO.evidence.shtml IDA,IMP]) | |||
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!align=left {{table_heading_style}} |Knock-Out Phenotype | |||
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lethal (see PMID:12000771) | lethal (see PMID:12000771) | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Expression | ||
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transcription unit(s): [[:Category:Txn_unit:lpxH|lpxH]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:lpxH|lpxH]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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[[kegg:ko00540.html|LPS biosynthesis]] | [[kegg:ko00540.html|LPS biosynthesis]] | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=lpxH&loc=MG1655:553163..552441,W3110:553163..552441,DH10B:492495..491773,REL606:525326..526048 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=525326&end=526048&gene=lpxH&aa=matlfiadlhlcveepaitagflrflagearkadalyilgdlfeawigdddpnplhrkmaaaikavsdsgvpcyfihgnrdfllgkrfaresgmtllpeekvlelygrrvlimhgdtlctddagyqafrakvhkpwlqtlflalplfvrkriaarmranskeansskslaimdvnqnavvsamekhqvqwlihghthrpavhelianqqpafrvvlgawhtegsmvkvtaddvelihfpf Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=lpxH+AND+escherichia+coli Pubmed(lpxH)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=lpxH Textpresso(lpxH)] | |||
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Revision as of 00:26, 22 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
lpxH |
|---|---|
| Gene Synonym(s) |
ECK0517, b0524, JW0513, ybbF[1] |
| Product Desc. |
Lipid A biosynthesis, UDP-2,3-diacylglucosamine pyrophosphatase[4] |
| Product Synonyms(s) |
UDP-2,3-diacylglucosamine pyrophosphatase[1], B0524[2][1], YbbF[2][1], LpxH[2][1] |
| Function from GO |
Molecular Function
Biological Process
|
| Knock-Out Phenotype |
lethal (see PMID:12000771[5]) |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
- ↑ Babinski, KJ et al. (2002) Accumulation of the lipid A precursor UDP-2,3-diacylglucosamine in an Escherichia coli mutant lacking the lpxH gene. J. Biol. Chem. 277 25947-56 PubMed