kdsC:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''kdsC'' | ''kdsC'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK3187, b3198, JW3165, yrbI, yrbJ''<ref name='LIB:Riley_2006'/> | ''ECK3187, b3198, JW3165, yrbI, yrbJ''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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3-deoxy-D-<i>manno</i>-octulosonate 8-phosphate phosphatase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | 3-deoxy-D-<i>manno</i>-octulosonate 8-phosphate phosphatase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | ||
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3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; KDO 8-P phosphatase; LPS biosynthesis; HAD22<ref name='LIB:EcoGene'/> | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; KDO 8-P phosphatase; LPS biosynthesis; HAD22<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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3-deoxy-D-manno-octulosonate 8-phosphate phosphatase<ref name='LIB:Riley_2006'/>, B3198<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YrbJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, KdsC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YrbI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase<ref name='LIB:Riley_2006'/>, B3198<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YrbJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, KdsC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YrbI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): | transcription unit(s): | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=kdsC&loc=MG1655:3340295..3340861,W3110:3342128..3342694,DH10B:3438040..3438606,REL606:3277508..3278074 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3277508&end=3278074&gene=kdsC&aa=mskagaslatcygpvsadviakaenirllildvdgvlsdgliymgnngeelkafnvrdgygircaltsdievaiitgrkaklvedrcatlgithlyqgqsnkliafsdlleklaiapenvayvgddlidwpvmekvglsvavadahpllipradyvtriaggrgavrevcdllllaqgkldeakgqsi Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=kdsC+AND+escherichia+coli Pubmed(kdsC)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=kdsC Textpresso(kdsC)] | |||
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Revision as of 23:48, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
kdsC |
|---|---|
| Gene Synonym(s) |
ECK3187, b3198, JW3165, yrbI, yrbJ[1] |
| Product Desc. |
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase[2][3]; Component of [[:Category:Complex:3-deoxy-D-manno-octulosonate 8-phosphate phosphatase|3-deoxy-D-manno-octulosonate 8-phosphate phosphatase]][2][3] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; KDO 8-P phosphatase; LPS biosynthesis; HAD22[4] |
| Product Synonyms(s) |
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase[1], B3198[2][1], YrbJ[2][1], KdsC[2][1], YrbI[2][1] |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
YrbI is renamed as KdsC (personal comm., R.W. Woodard, Univ. of Mich.). KdsC native N-terminal sequence is from E. coli B. Cloned kdsC is from BL21. KdsC is tetrameric and requires a divalent metal cofactor. HAD superfamily.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.