gspD:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''gspD'' | ''gspD'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK3312, b3325, JW5707, yheF''<ref name='LIB:Riley_2006'/> | ''ECK3312, b3325, JW5707, yheF''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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putative protein secretion protein for export<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | putative protein secretion protein for export<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | ||
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Part of H-NS-silenced gsp divergon, type II protein secretion; OM secretin; cloned gsp divergon secretes ChiA<ref name='LIB:EcoGene'/> | Part of H-NS-silenced gsp divergon, type II protein secretion; OM secretin; cloned gsp divergon secretes ChiA<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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general secretory pathway component, cryptic<ref name='LIB:Riley_2006'/>, B3325<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YheF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GspD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | general secretory pathway component, cryptic<ref name='LIB:Riley_2006'/>, B3325<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YheF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GspD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:gspC|gspC]]<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | transcription unit(s): [[:Category:Txn_unit:gspC|gspC]]<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=gspD&loc=MG1655:3454399..3456351,W3110:4184039..4182087,REL606:3384282..3386234,DH10B:3552144..3554096 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3552144&end=3554096&gene=gspD&aa=mdcvmkglnkitccllaallmpcaghaeneqyganfnnadirqfveivgqhlgktilidpsvqgtisvrsndtfsqqeyyqfflsildlygysvitldngflkvvrsanvktspgmiadssrpgvgdelvtrivplenvpardlapllrqmmdagsvgnvvhyepsnvliltgrastinklievikrvdvigtekqqiihleyasaedlaeilnqliseshgksqmpallsakivadkrtnsliisgpekarqritsllksldveeseegntrvyylkyakatnlvevltgvseklkdekgnarkpsssgamdnvaitadeqtnslvitadqsvqeklatviarldirraqvlveaiivevqdgnglnlgvqwanknvgaqqftntglpifnaaqgvadykknggitsanpawdmfsayngmaagffngdwgvlltalasnnkndilatpsivtldnklasfnvgqdvpvlsgsqttsgdnvfntverktvgtklkvtpqvnegdavlleieqevssvdsssnstlgptfntrtiqnavlvktgetvvlggllddfskeqvskvpllgdiplvgqlfrytsterakrnlmvfirptiirdddvyrslskekytryrqeqqqridgkskalvgsedlpvldentfnshapapssr Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=gspD+AND+escherichia+coli Pubmed(gspD)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=gspD Textpresso(gspD)] | |||
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Revision as of 23:53, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
gspD |
|---|---|
| Gene Synonym(s) |
ECK3312, b3325, JW5707, yheF[1] |
| Product Desc. |
putative protein secretion protein for export[2][3]; Component of GspC-O secreton complex[3] Part of H-NS-silenced gsp divergon, type II protein secretion; OM secretin; cloned gsp divergon secretes ChiA[4] |
| Product Synonyms(s) |
general secretory pathway component, cryptic[1], B3325[2][1], YheF[2][1], GspD[2][1] |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
A divergon is a regulon comprised of two adjacent divergent operons or genes.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.