gltS:Quickview: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older editNewer edit →
Update TableEdit tables.
update QV table
Line 27: Line 27:


|-
|-
!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
||
||
''gltS''  
''gltS''  
|-
|-
!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
||
||
''ECK3643, b3653, JW3628, gltC''<ref name='LIB:Riley_2006'/>
''ECK3643, b3653, JW3628, gltC''<ref name='LIB:Riley_2006'/>
|-
|-
!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
||
||
glutamate GltS transporter<ref name='LIB:EcoCyc10.6'/>; GltS glutamate transporter<ref name='LIB:EcoCyc11.1'/>
glutamate GltS transporter<ref name='LIB:EcoCyc10.6'/>; GltS glutamate transporter<ref name='LIB:EcoCyc11.1'/>
Line 41: Line 41:
Glutamate permease; Na+/glutamate symporter<ref name='LIB:EcoGene'/>
Glutamate permease; Na+/glutamate symporter<ref name='LIB:EcoGene'/>
|-
|-
!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
||
||
glutamate transporter<ref name='LIB:Riley_2006'/>, B3653<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GltC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GltS<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
glutamate transporter<ref name='LIB:Riley_2006'/>, B3653<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GltC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GltS<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
|-
|-
!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
||
||
'''Biological Process'''
* GO:0006814 sodium ion transport ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0015813 L-glutamate transport ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Molecular Function'''
* GO:0015501 glutamate:sodium symporter activity ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0031402 sodium ion binding ([http://www.geneontology.org/GO.evidence.shtml IDA])


|-
|-
!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
||
 
|-
!align=left {{table_heading_style}} |Regulation/Expression
||
||
transcription unit(s): [[:Category:Txn_unit:gltS|gltS]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:gltS|gltS]]<ref name='LIB:EcoCyc10.6'/>  
|-
|-
!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
||
||


|-
!align=left {{table_heading_style}} |Quick Links
||
[http://ecoliwiki.net/tools/display_dna.php?gene=gltS&loc=MG1655:3826688..3825483,W3110:3811750..3812955,REL606:3767707..3766502,DH10B:3924272..3923067 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3924272&end=3923067&gene=gltS&aa=mfhldtlatlvaatltlllgrklvhsvsflkkytipepvaggllvalallvlkksmgwevnfdmslrdplmlaffatiglnaniaslraggrvvgiflivvvgllvmqnaigigmasllgldplmgllagsitlsgghgtgaawsklfierygftnatevamacatfglvlggliggpvarylvkhsttpngipddqevptafekpdvgrmitslvlietialiaicltvgkivaqllagtafelptfvcvlfvgvilsnglsimgfyrvferavsvlgnvslslflamalmglklwelaslalpmlailvvqtifmalyaifvtwrmmgknydaavlaaghcgfglgatptaianmqaiterfgpshmaflvvpmvgaffidivnalviklylmlpifag Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=gltS+AND+escherichia+coli Pubmed(gltS)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=gltS Textpresso(gltS)]


|- class="tableEdit_footer"  
|- class="tableEdit_footer"  

Revision as of 00:32, 22 January 2010

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

gltS

Gene Synonym(s)

ECK3643, b3653, JW3628, gltC[1]

Product Desc.

glutamate GltS transporter[2]; GltS glutamate transporter[3]

Glutamate permease; Na+/glutamate symporter[4]

Product Synonyms(s)

glutamate transporter[1], B3653[2][1], GltC[2][1], GltS[2][1]

Function from GO

Biological Process

Molecular Function

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): gltS[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(gltS)    Textpresso(gltS)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


Predicted to be in the ST(3) structural class based on hydropathy profile (Lolkema, 2003), but is was not placed in the very similar IT superfamily in a study using phylogenetic methods (Prakash, 2003).[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=gltS:Quickview&oldid=1033460"