gatY:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''gatY'' | ''gatY'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK2089, b2096, JW5343, yegF''<ref name='LIB:Riley_2006'/> | ''ECK2089, b2096, JW5343, yegF''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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GatY<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | GatY<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | ||
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D-Tagatose-1,6-bisphosphate aldolase, class II; requires GatZ subunit for full activity and stability<ref name='LIB:EcoGene'/> | D-Tagatose-1,6-bisphosphate aldolase, class II; requires GatZ subunit for full activity and stability<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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D-tagatose 1,6-bisphosphate aldolase 2, catalytic subunit<ref name='LIB:Riley_2006'/>, B2096<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YegF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GatY<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | D-tagatose 1,6-bisphosphate aldolase 2, catalytic subunit<ref name='LIB:Riley_2006'/>, B2096<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YegF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GatY<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:gatYZABCD|gatYZABCD]]<ref name='LIB:EcoCyc10.6'/>, OP00231 | transcription unit(s): [[:Category:Txn_unit:gatYZABCD|gatYZABCD]]<ref name='LIB:EcoCyc10.6'/>, OP00231 | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=gatY&loc=MG1655:2175226..2174372,W3110:2180538..2179684,REL606:2131341..2130487,DH10B:2266234..2265380 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2266234&end=2265380&gene=gatY&aa=mkmyvvstkqmlnnaqrggyavpafnihnletmqvvvetaanlhapviiagtpgtfthagtenllalvsamakqyhhplaihldhhtkfddiaqkvrsgvrsvmidashlpfaqnisrvkevvdfchrfdvsveaelgqlggqeddvqvneadalytnpaqarefaeatgidslavaigtahgmyasapaldfsrlenirqwvnlplvlhgasglstkdiqqtiklgickinvatelknafsqalknyltehpeatdprdylqsaksamrdvvskviadcgcegra Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=gatY+AND+escherichia+coli Pubmed(gatY)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=gatY Textpresso(gatY)] | |||
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Revision as of 23:56, 21 January 2010
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
gatY |
|---|---|
| Gene Synonym(s) |
ECK2089, b2096, JW5343, yegF[1] |
| Product Desc. |
Component of tagatose-1,6-bisphosphate aldolase 2[3] D-Tagatose-1,6-bisphosphate aldolase, class II; requires GatZ subunit for full activity and stability[4] |
| Product Synonyms(s) |
D-tagatose 1,6-bisphosphate aldolase 2, catalytic subunit[1], B2096[2][1], YegF[2][1], GatY[2][1] |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
GatY is down 6X during growth at 4C (enabled by Oleispira antarctica Cpn10/60 transgene). kbaY, gatY, fbaA and ydjI are paralogs. Crp activated.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.