fumB:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''fumB'' | ''fumB'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK4115, b4122, JW4083''<ref name='LIB:Riley_2006'/> | ''ECK4115, b4122, JW4083''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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fumarase B<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | fumarase B<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | ||
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Fumarase B, anaerobic<ref name='LIB:EcoGene'/> | Fumarase B, anaerobic<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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anaerobic class I fumarate hydratase (fumarase B) product<ref name='LIB:Riley_2006'/>, B4122 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, FumB product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | anaerobic class I fumarate hydratase (fumarase B) product<ref name='LIB:Riley_2006'/>, B4122 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, FumB product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Biological Process''' | |||
* GO:0042710 biofilm formation ([http://www.geneontology.org/GO.evidence.shtml IMP]) | |||
'''Cellular Component''' | |||
* GO:0005829 cytosol ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:dcuB-fumB|dcuB-fumB]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:fumB|fumB]]<ref name='LIB:EcoCyc10.6'/>, OP00218 | transcription unit(s): [[:Category:Txn_unit:dcuB-fumB|dcuB-fumB]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:fumB|fumB]]<ref name='LIB:EcoCyc10.6'/>, OP00218 | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=fumB&loc=MG1655:4345349..4343703,W3110:4352004..4350358,REL606:4326041..4324395,DH10B:4445711..4444065 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4445711&end=4444065&gene=fumB&aa=msnkpfiyqapfpmgkdnteyylltsdyvsvadfdgetilkvepealtllaqqafhdasfmlrpahqkqvaailhdpeasendkyvalqflrnseiaakgvlptcqdtgtaiivgkkgqrvwtgggdeetlskgvyntyiednlrysqnaaldmykevntgtnlpaqidlyavdgdeykflcvakgggsanktylyqetkalltpgklknflvekmrtlgtaacppyhiafviggtsaetnlktvklasahyydelptegnehgqafrdvqleqelleeaqklglgaqfggkyfahdirvirlprhgascpvgmgvscsadrnikakinregiwieklehnpgqyipqelrqagegeavkvdlnrpmkeilaqlsqypvstrlsltgtiivgrdiahaklkelidagkelpqyikdhpiyyagpaktpagypsgslgpttagrmdsyvdllqshggsmimlakgnrsqqvtdachkhggfylgsiggpaavlaqqsikhlecvaypelgmeaiwkievedfpafilvddkgndffqqivnkqcanctk Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=fumB+AND+escherichia+coli Pubmed(fumB)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=fumB Textpresso(fumB)] | |||
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Revision as of 23:57, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
fumB |
|---|---|
| Gene Synonym(s) |
ECK4115, b4122, JW4083[1] |
| Product Desc. |
Component of fumarase B[2][3] Fumarase B, anaerobic[4] |
| Product Synonyms(s) |
anaerobic class I fumarate hydratase (fumarase B) product[1], B4122 product[2][1], FumB product[2][1] |
| Function from GO |
Biological Process
Cellular Component
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
FumB is required for anaerobic D-tartrate utilization and fumB mutants have reduced D-tartrate dehydratase activity (Kim, 2007).[4]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.