copA:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''copA'' | ''copA'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK0478, b0484, JW0473, ybaR''<ref name='LIB:Riley_2006'/> | ''ECK0478, b0484, JW0473, ybaR''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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YbaR<ref name='LIB:EcoCyc10.6'/>; Cu<sup>+</sup>-exporting ATPase<ref name='LIB:EcoCyc11.1'/> | YbaR<ref name='LIB:EcoCyc10.6'/>; Cu<sup>+</sup>-exporting ATPase<ref name='LIB:EcoCyc11.1'/> | ||
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Copper-, silver-translocating P-type ATPase efflux pump; involved in copper resistance; copper- and silver-inducible; regulated by copper-responsive CueR activator<ref name='LIB:EcoGene'/> | Copper-, silver-translocating P-type ATPase efflux pump; involved in copper resistance; copper- and silver-inducible; regulated by copper-responsive CueR activator<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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copper transporter<ref name='LIB:Riley_2006'/>, B0484<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbaR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CopA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | copper transporter<ref name='LIB:Riley_2006'/>, B0484<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbaR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CopA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Cellular Component''' | |||
* GO:0031224 intrinsic to membrane ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
* GO:0016021 integral to membrane ([http://www.geneontology.org/GO.evidence.shtml ISM]) | |||
'''Molecular Function''' | |||
* GO:0015662 ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
* GO:0016887 ATPase activity ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
'''Biological Process''' | |||
* GO:0006825 copper ion transport ([http://www.geneontology.org/GO.evidence.shtml IMP]) | |||
* GO:0010273 detoxification of copper ion ([http://www.geneontology.org/GO.evidence.shtml IMP]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:copA|copA]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:copA|copA]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=copA&loc=MG1655:510603..508099,W3110:510603..508099,DH10B:449934..447430,REL606:483547..481043 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=483547&end=481043&gene=copA&aa=msqtidltldglscghcvkrvkesleqrpdveqadvsiteahvtgtasaeqlietikqagydasvshpkakplaessipsealtavsealpaataddddsqqlllsgmscascvtrvqnalqsvpgvtqarvnlaertalvmgsaspqdlvqavekagygaeaieddakrrerqqetavatmkrfrwqaivalavgipvmvwgmigdnmmvtadnrslwlviglitlavmvfagghfyrsawksllngaatmdtlvalgtgvawlysmsvnlwpqwfpmearhlyyeasamiiglinlghmleararqrsskaleklldltpptarlvtdegeksvplaevqpgmllrlttgdrvpvdgeitqgeawldeamltgepipqqkgegdsvhagtvvqdgsvlfrasavgshttlsriirmvrqaqsskpeigqladkisavfvpvvvvialvsaaiwyffgpapqivytlviattvliiacpcalglatpmsiisgvgraaefgvlvrdadalqrastldtvvfdktgtltegkpqvvavktfadvdeaqalrlaaaleqgsshplaraildkagdmqlpqvngfrtlrglgvsgeaeghalllgnqallneqqvgtkaieaeitaqasqgatpvllavdgkavallavrdplrsdsvaalqrlhkagyrlvmltgdnpttanaiakeagideviagvlpdgkaeaikhlqsegrqvamvgdgindapalaqadvgiamgggsdvaietaaitlmrhslmgvadalaisratlhnmkqnllgafiynsigipvaagilwpftgtllnpvvagaamalssitvvsnanrllrfkpke Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=copA+AND+escherichia+coli Pubmed(copA)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=copA Textpresso(copA)] | |||
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Revision as of 00:06, 22 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
copA |
|---|---|
| Gene Synonym(s) |
ECK0478, b0484, JW0473, ybaR[1] |
| Product Desc. |
YbaR[2]; Cu+-exporting ATPase[3] Copper-, silver-translocating P-type ATPase efflux pump; involved in copper resistance; copper- and silver-inducible; regulated by copper-responsive CueR activator[4] |
| Product Synonyms(s) | |
| Function from GO |
Cellular Component
Molecular Function
Biological Process
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Upregulated by GSNO in defined medium (anaerobic). HAD superfamily. CopA contains a putative phosphatase HAD domain: residues 516-740.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.