cobT:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''cobT'' | ''cobT'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK1986, b1991, JW1969''<ref name='LIB:Riley_2006'/> | ''ECK1986, b1991, JW1969''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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CobT<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | CobT<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | ||
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Partial cobalamin biosynthesis pathway present in E. coli<ref name='LIB:EcoGene'/> | Partial cobalamin biosynthesis pathway present in E. coli<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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nicotinate-nucleotide dimethylbenzimidazole-P phophoribosyl transferase<ref name='LIB:Riley_2006'/>, B1991<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CobT<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | nicotinate-nucleotide dimethylbenzimidazole-P phophoribosyl transferase<ref name='LIB:Riley_2006'/>, B1991<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CobT<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0008939 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity ([http://www.geneontology.org/GO.evidence.shtml IGI]) | |||
'''Biological Process''' | |||
* GO:0009236 cobalamin biosynthetic process ([http://www.geneontology.org/GO.evidence.shtml IGI]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:cobUST|cobUST]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:cobUST|cobUST]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=cobT&loc=MG1655:2062491..2061412,W3110:2066604..2065525,DH10B:2153499..2152420,REL606:2002467..2001388 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2002467&end=2001388&gene=cobT&aa=mqiladllntipaidstamsraqrhidgllkpvgslgklevlaiqlagmpglngiphvgkkavlvmcadhgvweegvaispkevtaiqaenmtrgttgvcvlaeqaganvhvidvgidtaepipglinmrvargsgniasapamsrrqaekllldvicytqelakngvtlfgvgelgmanttpaaaivstitgrdpeevvgiganlptdklankidvvrraitlnqpnpqdgvdvlakvggfdlvgiagvmlgaascglpvlldgflsyaaalaacqmspaikpylipshlsaekgarialshlglepylnmemrlgegsgaalampiieaacaiynnmgelaasnivlpgnttsdlns Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=cobT+AND+escherichia+coli Pubmed(cobT)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=cobT Textpresso(cobT)] | |||
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Revision as of 00:07, 22 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
cobT |
|---|---|
| Gene Synonym(s) |
ECK1986, b1991, JW1969[1] |
| Product Desc. |
Component of dimethylbenzimidazole phosphoribosyltransferase[2]; nicotinate-nucleotide dimethylbenzimidazole phosphoribosyltransferase[3] Partial cobalamin biosynthesis pathway present in E. coli[4] |
| Product Synonyms(s) |
nicotinate-nucleotide dimethylbenzimidazole-P phophoribosyl transferase[1], B1991[2][1], CobT[2][1] |
| Function from GO |
Molecular Function
Biological Process
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.