chaA:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''chaA'' | ''chaA'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK1210, b1216, JW1207''<ref name='LIB:Riley_2006'/> | ''ECK1210, b1216, JW1207''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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ChaA calcium CaCA transporter<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ChaA calcium CaCA transporter<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Ca2+/H+ and K+/H+ antiporter; extrudes potassium ions, and also sodium ions at alkaline pH; regulated by osmolarity and pH<ref name='LIB:EcoGene'/> | Ca2+/H+ and K+/H+ antiporter; extrudes potassium ions, and also sodium ions at alkaline pH; regulated by osmolarity and pH<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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calcium/sodium:proton antiporter<ref name='LIB:Riley_2006'/>, B1216<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ChaA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | calcium/sodium:proton antiporter<ref name='LIB:Riley_2006'/>, B1216<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ChaA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Biological Process''' | |||
* GO:0006813 potassium ion transport ([http://www.geneontology.org/GO.evidence.shtml IGI]) | |||
* GO:0006814 sodium ion transport ([http://www.geneontology.org/GO.evidence.shtml IGI]) | |||
* GO:0006816 calcium ion transport ([http://www.geneontology.org/GO.evidence.shtml IMP]) | |||
* GO:0006883 cellular sodium ion homeostasis ([http://www.geneontology.org/GO.evidence.shtml IGI]) | |||
* GO:0015992 proton transport ([http://www.geneontology.org/GO.evidence.shtml IGI]) | |||
* GO:0030007 cellular potassium ion homeostasis ([http://www.geneontology.org/GO.evidence.shtml IGI]) | |||
* GO:0051481 reduction of cytosolic calcium ion concentration ([http://www.geneontology.org/GO.evidence.shtml IMP]) | |||
'''Molecular Function''' | |||
* GO:0015491 cation:cation antiporter activity ([http://www.geneontology.org/GO.evidence.shtml IGI]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:chaA|chaA]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:chaA|chaA]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=chaA&loc=MG1655:1271072..1269972,W3110:1273426..1272326,DH10B:1311313..1310213,REL606:1271998..1270898 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1271998&end=1270898&gene=chaA&aa=msnaqeavktrhketslifpvlalvvlflwgssqtlpvviainllaligilssafsvvrhadvlahrlgepygslilslsvvilevslisalmatgdaaptlmrdtlysiimivtgglvgfslllggrkfatqymnlfgikqylialfplaiivlvfpmalpaanfstgqallvalisaamygvflliqtkthqslfvyeheddsddddphhgkpsahsslwhaiwliihliaviavtkmnassletlldsmnapvaftgflvallilspeglgalkavlnnqvqramnlffgsvlatisltvpvvtliafmtgnelqfalgapemvvmvaslvlchisfstgrtnvlngaahlalfaaylmtifa Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=chaA+AND+escherichia+coli Pubmed(chaA)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=chaA Textpresso(chaA)] | |||
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Revision as of 00:07, 22 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
chaA |
|---|---|
| Gene Synonym(s) |
ECK1210, b1216, JW1207[1] |
| Product Desc. |
ChaA calcium CaCA transporter[2][3] Ca2+/H+ and K+/H+ antiporter; extrudes potassium ions, and also sodium ions at alkaline pH; regulated by osmolarity and pH[4] |
| Product Synonyms(s) |
calcium/sodium:proton antiporter[1], B1216[2][1], ChaA[2][1] |
| Function from GO |
Biological Process
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
Categories:
- GO:0006813 ! potassium ion transport
- GO:0006814 ! sodium ion transport
- GO:0006816 ! calcium ion transport
- GO:0006883 ! cellular sodium ion homeostasis
- GO:0015992 ! proton transport
- GO:0030007 ! cellular potassium ion homeostasis
- GO:0051481 ! negative regulation of cytosolic calcium ion concentration
- GO:0015491 ! cation:cation antiporter activity