atpD:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''atpD'' | ''atpD'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK3725, b3732, JW3710, papD, uncD, papB, unc''<ref name='LIB:Riley_2006'/> | ''ECK3725, b3732, JW3710, papD, uncD, papB, unc''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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ATP synthase, F1 complex, β subunit<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | ATP synthase, F1 complex, β subunit<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | ||
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ATP synthase subunit beta, membrane-bound, F1 sector<ref name='LIB:EcoGene'/> | ATP synthase subunit beta, membrane-bound, F1 sector<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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F1 sector of membrane-bound ATP synthase, beta subunit<ref name='LIB:Riley_2006'/>, B3732<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Unc<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, UncD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PapB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AtpD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | F1 sector of membrane-bound ATP synthase, beta subunit<ref name='LIB:Riley_2006'/>, B3732<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Unc<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, UncD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PapB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AtpD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI]) | |||
* GO:0046933 hydrogen ion transporting ATP synthase activity, rotational mechanism ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
'''Cellular Component''' | |||
* GO:0005737 cytoplasm ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
* GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) ([http://www.geneontology.org/GO.evidence.shtml IMP]) | |||
'''Biological Process''' | |||
* GO:0015986 ATP synthesis coupled proton transport ([http://www.geneontology.org/GO.evidence.shtml IMP]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:atpBEFHAGDC|atpBEFHAGDC]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:atpIBEFHAGDC|atpIBEFHAGDC]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:atpBEFHAGDC|atpBEFHAGDC]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:atpIBEFHAGDC|atpIBEFHAGDC]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=atpD&loc=MG1655:3915398..3914016,W3110:3719306..3720688,REL606:3877741..3876359,DH10B:4012982..4011600 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4012982&end=4011600&gene=atpD&aa=matgkivqvigavvdvefpqdavprvydalevqngnerlvlevqqqlgggivrtiamgssdglrrgldvkdlehpievpvgkatlgrimnvlgepvdmkgeigeeerwaihraapsyeelsnsqelletgikvidlmcpfakggkvglfggagvgktvnmmelirniaiehsgysvfagvgertregndfyhemtdsnvidkvslvygqmneppgnrlrvaltgltmaekfrdegrdvllfvdniyrytlagtevsallgrmpsavgyqptlaeemgvlqeritstktgsitsvqavyvpaddltdpspattfahldatvvlsrqiaslgiypavdpldstsrqldplvvgqehydtargvqsilqryqelkdiiailgmdelseedklvvararkiqrflsqpffvaevftgspgkyvslkdtirgfkgimegeydhlpeqafymvgsieeavekakkl Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=atpD+AND+escherichia+coli Pubmed(atpD)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=atpD Textpresso(atpD)] | |||
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Revision as of 00:09, 22 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
atpD |
|---|---|
| Gene Synonym(s) |
ECK3725, b3732, JW3710, papD, uncD, papB, unc[1] |
| Product Desc. |
ATP synthase, F1 complex, β subunit[2][3]; Component of β subunit complex[2][3]; ATP synthase, F1 complex[2][3]; ATP synthase[2][3] ATP synthase subunit beta, membrane-bound, F1 sector[4] |
| Product Synonyms(s) |
F1 sector of membrane-bound ATP synthase, beta subunit[1], B3732[2][1], Unc[2][1], UncD[2][1], PapB[2][1], AtpD[2][1] |
| Function from GO |
Molecular Function
Cellular Component
Biological Process
|
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): atpBEFHAGDC[2], atpIBEFHAGDC[2] |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Binds TrxA (Kumar, 2004). HT_Cmplx10_Mem: AtpA+AtpD+AtpG. HT_Cmplx1_Cyt: AtpA+AtpD.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 3.2 3.3 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.