aidB:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''aidB'' | ''aidB'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK4183, b4187, JW5867''<ref name='LIB:Riley_2006'/> | ''ECK4183, b4187, JW5867''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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EG11811- | EG11811- | ||
Flavin-containing, DNA binding protein; low level isovaleryl CoA dehydrogenase activity; Ada-regulated adaptive response to DNA methylation damage<ref name='LIB:EcoGene'/> | Flavin-containing, DNA binding protein; low level isovaleryl CoA dehydrogenase activity; Ada-regulated adaptive response to DNA methylation damage<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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isovaleryl CoA dehydrogenase product<ref name='LIB:Riley_2006'/>, B4187 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AidB product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | isovaleryl CoA dehydrogenase product<ref name='LIB:Riley_2006'/>, B4187 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AidB product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0003677 DNA binding ([http://www.geneontology.org/GO.evidence.shtml IPI]) | |||
* GO:0008470 isovaleryl-CoA dehydrogenase activity ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
'''Biological Process''' | |||
* GO:0006950 response to stress ([http://www.geneontology.org/GO.evidence.shtml IEP]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:aidB|aidB]]<ref name='LIB:EcoCyc10.6'/>, OP00135 | transcription unit(s): [[:Category:Txn_unit:aidB|aidB]]<ref name='LIB:EcoCyc10.6'/>, OP00135 | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=aidB&loc=MG1655:4412298..4413923,W3110:4418955..4420580,REL606:4392430..4394055,DH10B:4512660..4514285 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4512660&end=4514285&gene=aidB&aa=megdtvhwqthtvfnqpiplnnsnlylsdgalceavtregagwdsdflasigqqlgtaeslelgrlanvnppellrydaqgrrlddvrfhpawhllmqalctnrvhnlaweedarsgafvaraarfmlhaqveagslcpitmtfaatplllqmlpapfqdwttpllsdrydshllpggqkrglligmgmtekqggsdvmsnttraerledgsyrlvghkwffsvpqsdahlvlaqtagglscffvprflpdgqrnairlerlkdklgnrsnascevefqdaigwllglegegirlilkmggmtrfdcalgshammrrafslaiyhahqrhvfgnpliqqplmrhvlsrmalqlegqtallfrlarawdrradakealwarlftpaakfvickrgmpfvaeamevlggigyceeselprlyrempvnsiwegsgnimcldvlrvlnkqagvydllseafvevkgqdryfdravrrlqqqlrkpaeelgreithqlfllgcgaqmlkyasppmaqawcqvmldtrggvrlseqiqndlllratggvcv Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=aidB+AND+escherichia+coli Pubmed(aidB)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=aidB Textpresso(aidB)] | |||
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Revision as of 00:12, 22 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
aidB |
|---|---|
| Gene Synonym(s) |
ECK4183, b4187, JW5867[1] |
| Product Desc. |
EG11811- Flavin-containing, DNA binding protein; low level isovaleryl CoA dehydrogenase activity; Ada-regulated adaptive response to DNA methylation damage[2] |
| Product Synonyms(s) |
isovaleryl CoA dehydrogenase product[1], B4187 product[3][1], AidB product[3][1] |
| Function from GO |
Molecular Function
Biological Process
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Induced by anaerobiosis and acetate. Overexpression reduces nitrosoguanidine-induced mutagenesis.[2]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
- ↑ 3.0 3.1 3.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7