abgA:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''abgA'' | ''abgA'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK1334, b1338, JW5205, ydaJ''<ref name='LIB:Riley_2006'/> | ''ECK1334, b1338, JW5205, ydaJ''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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protein with similarity to aminoacyl aminohydrolases<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | protein with similarity to aminoacyl aminohydrolases<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Required for p-aminobenzoyl-glutamate utilization<ref name='LIB:EcoGene'/> | Required for p-aminobenzoyl-glutamate utilization<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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predicted peptidase, aminobenzoyl-glutamate utilization protein<ref name='LIB:Riley_2006'/>, B1338<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdaJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AbgA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | predicted peptidase, aminobenzoyl-glutamate utilization protein<ref name='LIB:Riley_2006'/>, B1338<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdaJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AbgA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:ogt|ogt]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:ogt|ogt]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=abgA&loc=MG1655:1402589..1401279,W3110:1406279..1404969,DH10B:1491985..1490675,REL606:1401735..1400425 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1401735&end=1400425&gene=abgA&aa=mtgkvmeslnqfvnslapklshwrrdfhhyaesgwvefrtatlvaeelhqlgyslalgrevvnessrmglpdeftlqreferarqqgalaqwiaafeggftgivatldtgrpgpvmafrvdmdaldlseeqdvshrpyrdgfascnagmmhacghdghtaiglglahtlkqfesglhgviklifqpaeegtrgaramvdagvvddvdyftavhigtgvpagtvvcgsdnfmattkfdahftgtaahagakpedghnallaaaqatlalhaiaphsegasrvnvgvmqagsgrnvvpasallkvetrgasdvinqyvfdraqqaiqgaatmygvgvetrlmgaatasspspqwvawlqsqaaqvagvnqaierveapagsedatlmmarvqqhqgqasyvvfgtqlaaghhnekfdfdeqvlaiavetlartalnfpwtrgi Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=abgA+AND+escherichia+coli Pubmed(abgA)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=abgA Textpresso(abgA)] | |||
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Revision as of 00:34, 22 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
abgA |
|---|---|
| Gene Synonym(s) |
ECK1334, b1338, JW5205, ydaJ[1] |
| Product Desc. |
protein with similarity to aminoacyl aminohydrolases[2][3] Required for p-aminobenzoyl-glutamate utilization[4] |
| Product Synonyms(s) |
predicted peptidase, aminobenzoyl-glutamate utilization protein[1], B1338[2][1], YdaJ[2][1], AbgA[2][1] |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
abgAB expression is required for catabolism to feed p-aminobenzoate auxotrophs (Hussein, 1998; Carter, 2007). AbgAB probably catalyzes the hydrolysis of p-aminobenzoyl-glutamate to p-aminobenzoate (Carter, 2007). The abg operon is silent and an AbgR inducer has not been found (Hussein, 1998; Carter, 2007). AbgB is a member of the M20 peptidase family. abgA and abgB are paralogs.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.