gpmA:Evolution: Difference between revisions

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Revision as of 01:27, 9 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000015800 (score: 1.000; bootstrap: 98%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000005507 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT1G22170 (score: 1.000; bootstrap: 100%)
  • AT1G78050 (score: 0.632)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000016874 (score: 1.000; bootstrap: 97%)
  • ENSBTAP00000019336 (score: 0.585)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000013328 (score: 1.000; bootstrap: 97%)
  • ENSCAFP00000004259 (score: 0.567)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000016603 (score: 1.000; bootstrap: 100%)
  • ENSCINP00000008164 (score: 0.487)

From Inparanoid:20070104

Danio rerio

  • ZDB-CDNA-040425-652 (score: 1.000; bootstrap: 93%)
  • ZDB-GENE-030131-1827 (score: 1.000; bootstrap: 94%)
  • ZDB-CDNA-040425-653 (score: 1.000; bootstrap: 94%)
  • ZDB-CDNA-040425-1299 (score: 0.869)
  • ZDB-GENE-030131-5376 (score: 0.869)
  • ZDB-GENE-040519-1 (score: 0.752)
  • ZDB-CDNA-040425-654 (score: 0.575)
  • ZDB-GENE-040116-6 (score: 0.575)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0231354 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0014869 (score: 1.000; bootstrap: 99%)
  • FBgn0011270 (score: 0.512)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA14392-PA (score: 1.000; bootstrap: 99%)
  • GA14593-PA (score: 0.477)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000021309 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000351067 (score: 1.000; bootstrap: 96%)
  • ENSP00000306191 (score: 1.000; bootstrap: 96%)
  • ENSP00000348237 (score: 0.986)
  • ENSP00000334304 (score: 0.889)
  • ENSP00000348804 (score: 0.889)
  • ENSP00000297283 (score: 0.597)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000026333 (score: 1.000; bootstrap: 97%)
  • ENSMMUP00000013841 (score: 0.653)
  • ENSMMUP00000003245 (score: 0.588)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000005228 (score: 1.000; bootstrap: 99%)
  • ENSMODP00000017399 (score: 0.580)
  • ENSMODP00000022556 (score: 0.384)
  • ENSMODP00000015821 (score: 0.155)

From Inparanoid:20070104

Mus musculus

  • MGI:3645709 (score: 1.000; bootstrap: 97%)
  • MGI:3643310 (score: 1.000; bootstrap: 97%)
  • MGI:97552 (score: 0.991)
  • MGI:1933118 (score: 0.548)

From Inparanoid:20070104

Oryza gramene

  • Q67UJ0 (score: 1.000; bootstrap: 100%)
  • Q6Z8J0 (score: 0.643)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000032683 (score: 1.000; bootstrap: 93%)
  • ENSPTRP00000004915 (score: 0.187)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000018227 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YKL152C (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPAC26F16 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000143399 (score: 1.000; bootstrap: 95%)
  • NEWSINFRUP00000153098 (score: 0.715)
  • NEWSINFRUP00000182800 (score: 0.491)
  • NEWSINFRUP00000181195 (score: 0.056)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00026289001 (score: 1.000; bootstrap: 97%)
  • GSTENP00016506001 (score: 0.750)
  • GSTENP00011651001 (score: 0.509)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000049101 (score: 1.000; bootstrap: 76%)
  • ENSXETP00000039940 (score: 0.578)

From Inparanoid:20070104

Shigella flexneri

GPMA

From SHIGELLACYC

E. coli O157

GPMA

From ECOO157CYC

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

PFAM (EcoliWiki Page)

PFAM:PF00300


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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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