ais:Expression: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
Adding Molecules/Cell table.
Changing Intracellular heading to Cellular
Line 27: Line 27:




==Intracellular Levels==
==Cellular Levels==
{{BacktoTop}}
{{BacktoTop}}
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.38369.F49c01bad48c60-->
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.38369.F49c01bad48c60-->
Line 35: Line 35:
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  
*  
****************************************************************************************** -->
****************************************************************************************** -->{{Help Cellular levels}}
{|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"   
{|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"   
|- align='left' bgcolor='#CCCCFF'
|- align='left' bgcolor='#CCCCFF'
!|Molecule!!Organism or Strain!!Molecules per cell!!Growth conditions!!Growth rate!!Assay used!!Notes!!Reference(s)
!|Molecule!!Organism or Strain!!Cellular level!!Units!!Medium!!Temperature °C!!Other (e.g. anaerobic)!!Growth rate!!Assay used!!Notes!!Reference(s)


|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.38369.F49c01bad48c60&page=38369&pagename={{FULLPAGENAMEE}}&type=0&template=MoleculesPerCellTable edit table]
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.38369.F49c01bad48c60&page=38369&pagename={{FULLPAGENAMEE}}&type=0&template=MoleculesPerCellTable edit table] || || || || || || || || || ||
|}
|}
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.38369.F49c01bad48c60-->
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.38369.F49c01bad48c60-->

Revision as of 19:13, 8 June 2009

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Overview Transcription Translation Turnover Experimental Links References Suggestions

Overview

This is a placeholder for a summary statement on how expression of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.


Cellular Levels

[back to top]


See Help:Cellular levels

Molecule Organism or Strain Cellular level Units Medium Temperature °C Other (e.g. anaerobic) Growth rate Assay used Notes Reference(s)
edit table

Notes

Transcription and Transcriptional Regulation

[back to top]


See Help:Expression_transcription for help entering or editing information in this section of EcoliWiki.

Transcription unit(s)

ais

edit table
Figure courtesy of RegulonDB


Notes

This is a placeholder for a summary statement about how transcription of this gene is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Translation and Regulation of Translation

[back to top]


gbrowse_img.php?coord=2363622..2363662&genome=ecoli&name=MG1655&trackset=Genes_unlabeled+DNA_unlabeled+flip&width=400&.png
This picture shows the sequence around the N-terminus.

Notes

This is a placeholder for a summary statement about how translation of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Turnover and Regulation of Turnover

</protect>

Notes

This is a placeholder for a summary statement about turnover of this gene product. You can help EcoliWiki by becoming a user and writing/editing this statement.

Experimental

[back to top]


Mutations Affecting Expression See Help:Expression_mutations for help entering or editing information in this section of EcoliWiki.

Allele Name Mutation Phenotype Reference
edit table


Expression Studies See Help:Expression_studies for help entering or editing information in this section of EcoliWiki.

Type Reference Notes

microarray

GEO Profiles:b2252 (EcoliWiki Page)

NCBI GEO profiles for ais

microarray

GenExpDB:b2252 (EcoliWiki Page)

Summary of data for ais from multiple microarray studies

edit table


Expression Resources See Help:Expression_resources for help entering or editing information in this section of EcoliWiki.

Resource Name Resource Type Description Source Notes

GFP Fusion

Intergenic region (2363553..2363958) fused to gfpmut2.

OpenBioSystems

GFP fusion described in Zaslaver, et al.
Plate:109-AZ12; Well:A4[1]

edit table

<protect>

Notes

Accessions Related to ais Expression

[back to top]


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:G7165

EchoBASE (EcoliWiki Page)

EchoBASE:EB2949

EcoliGenExpDB (EcoliWiki Page)

EcoliGenExpDB:b2252

EcoGene (EcoliWiki Page)

EcoGene:EG13155


edit table


Notes

Links

[back to top]


Name URL Comments
edit table


References

[back to top]


  1. ↑ Zaslaver, A et al. (2006) A comprehensive library of fluorescent transcriptional reporters for Escherichia coli. Nat. Methods 3 623-8 PubMed


Categories

[back to top]