rseP:Quickview: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older editNewer edit →
imported>Wikientrybot
No edit summary
Update TableEdit tables.
Line 24: Line 24:
*  
*  
****************************************************************************************** -->{{Quickview_table_help}}
****************************************************************************************** -->{{Quickview_table_help}}
{|border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  
{| id="J49b023efcea67" class=" tableEdit New_Quickview_Table"


|-
|-
!align=left {{table_heading_style}} |Standard Name
!align=left |Standard Name
||
||
''rseP''  
''rseP''  
|-
|-
!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left |Gene Synonym(s)
||
||
''yaeL, ECK0175, b0176, JW0171, ecf, ecfE''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/><ref name='LIB:EcoCyc10.6'/>
''yaeL, ECK0175, b0176, JW0171, ecf, ecfE''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/><ref name='LIB:EcoCyc10.6'/>
|-
|-
!align=left {{table_heading_style}} |Product Desc.
!align=left |Product Desc.
||
||
zinc metallopeptidase<ref name='LIB:EcoCyc10.6'/>; RseP zinc protease<ref name='LIB:EcoCyc11.1'/>
zinc metallopeptidase<ref name='LIB:EcoCyc10.6'/>; RseP zinc protease<ref name='LIB:EcoCyc11.1'/>
Line 41: Line 41:
Inner membrane zinc RIP metalloprotease; activates RpoE by degrading RseA; multicopy rpoE suppresses rseP mutation<ref name='LIB:EcoGene'/>
Inner membrane zinc RIP metalloprotease; activates RpoE by degrading RseA; multicopy rpoE suppresses rseP mutation<ref name='LIB:EcoGene'/>
|-
|-
!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left |Product Synonyms(s)
||
||
zinc metallopeptidase<ref name='LIB:Riley_2006'/>, B0176<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, EcfE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YaeL<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RseP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
zinc metallopeptidase<ref name='LIB:Riley_2006'/>, B0176<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, EcfE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YaeL<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RseP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
|-
|-
!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left |Knock-Out Phenotype
||
||


|-
|-
!align=left {{table_heading_style}} |Regulation/Expression
!align=left |Regulation/Expression
||
||
transcription unit(s): [[:Category:Txn_unit:yaeL|yaeL]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:yaeL|yaeL]]<ref name='LIB:EcoCyc10.6'/>  
|-
|-
!align=left {{table_heading_style}} |Regulation/Activity
!align=left |Regulation/Activity
||
||




|-class='sortbottom'
|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.2113.J49b023efcea67&page=2113&pagename={{FULLPAGENAMEE}}&type=1&template=New_Quickview_Table edit table] ||
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.2113.J49b023efcea67&page=2113&pagename={{FULLPAGENAMEE}}&type=1&template=New_Quickview_Table edit table]</span> ||
|}
|}
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.2113.J49b023efcea67--></protect>
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.2113.J49b023efcea67--></protect>

Revision as of 05:49, 9 January 2010

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

rseP

Gene Synonym(s)

yaeL, ECK0175, b0176, JW0171, ecf, ecfE[1][2][3]

Product Desc.

zinc metallopeptidase[3]; RseP zinc protease[2]

Inner membrane zinc RIP metalloprotease; activates RpoE by degrading RseA; multicopy rpoE suppresses rseP mutation[4]

Product Synonyms(s)

zinc metallopeptidase[1], B0176[3][1], EcfE[3][1], YaeL[3][1], RseP[3][1]

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yaeL[3]

Regulation/Activity


edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


RpoE regulon. RseP activates RpoE and releases membrane-bound RseA-RpoE complexes. Cleavage occurs around RseA membrane domain generating the N-terminal and the soluable product. rseP is an essential gene, but deletion of ompCF or ompCA (or an sRNA rseX clone, which suppresses ompCA translation) allows growth. RseP or some other protease degrades RseA in the released complexes. The RseA periplasmic domain must be first clipped or degraded by DegS before it is a substrate for RseP. RseP is related to the E. faecalis Eep protein involved in bacterial regulated intramembrane proteolysis (RIP). RseP has been topology mapped using protein fusions. RseP is reported to degrade RpoE and RpoH in vitro and to be an negative, not positive, effector of RpoE action in vivo, but the physiological relevance and/or accuracy of this has been strongly challenged.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 3.3 3.4 3.5 3.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=rseP:Quickview&oldid=1015843"