rppH:Gene Product(s): Difference between revisions

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{{Tab|Quickview|nudH}}{{Tab|Gene|nudH}}{{Tab On|Gene Product(s)|nudH}}{{Tab|Expression|nudH}}{{Tab|Evolution|nudH}}{{Tab|On One Page|nudH}}{{TabsBottom}}
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|{{Sub}}[[Talk:{{PAGENAMEE}}| Suggestions]]
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</noinclude>[[Category:GO:0005737_!_cytoplasm]]
==Nomenclature==
==Nomenclature==
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!{{table heading style}} |Synonyms
!{{table heading style}} |Synonyms
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nucleotide hydrolase<ref name='LIB:Riley_2006'/>, B2830<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NudH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgdP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
nucleotide hydrolase product<ref name='LIB:Riley_2006'/>, B2830 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NudH product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgdP product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!{{table heading style}} |Product description
!{{table heading style}} |Product description
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putative  invasion protein<ref name='LIB:EcoCyc10.6'/>; putative  invasion protein<ref name='LIB:EcoCyc11.1'/>
putative  invasion protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


|-
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!{{table heading style}} |EC number (for enzymes)
!{{table heading style}} |EC number (for enzymes)
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*[http://www.brenda.uni-koeln.de/php/result_flat.php4?ecno=3.6.1.- 3.6.1.-]<ref name='LIB:Riley_2006'/>
** [http://www.brenda.uni-koeln.de/php/result_flat.php4?ecno=3.6.1.- 3.6.1.-]<ref name='LIB:Riley_2006'/>
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==Function==
==Function==
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===Gene Ontology===
<big>'''Gene Ontology'''</big>
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!Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
!Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
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===Interactions===
 
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<span id="Interactions"></span><big>'''Interactions'''</big>
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{|class = 'sortable' {{Prettytable}} id='52142'  
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===Notes===
===Notes===


==Localization==
==Localization==
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{|class = 'sortable' {{Prettytable}} id='116930'
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!Compartment!!Description!!Evidence!!Notes
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===Notes===
===Notes===


==Structure and Physical Properties==
==Structure and Physical Properties==
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===Physical Properties===
<span id="Sequence"></span><big>'''Physical Properties'''</big>
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54430 - 54680 (calc based on 7 Y, 8 W, and 2 C residues)  
54430 - 54680 (calc based on 7 Y, 8 W, and 2 C residues)  
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===Domains/Motifs/Modification Sites===
 
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<big>'''Domains/Motifs/Modification Sites'''</big>
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{|class = 'sortable' {{Prettytable}} id='52144'  
{|class = 'sortable' {{Prettytable}} id='172209'  
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!Type!!Residues!!Description!!Notes
!Type!!Residues!!Description!!Notes
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===Structure===


<span id="Structure"></span><big>'''Structure'''</big>
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{|class = 'sortable' {{Prettytable}} id='116931'
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!Structure Type!!Organism!!Accession!!Residues covered!!Notes
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==Gene Product Resources==
==Gene Product Resources==
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===Notes===
===Notes===


==Accessions in Other Databases==
==Accessions in Other Databases==
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==Links==
==Links==
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==References==
==References==
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__NOTOC__
__NOTOC__
[[Category:GO:0005737]]</noinclude>
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Revision as of 16:14, 28 July 2007

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Function Interactions Localization Sequence Structure Resources Accessions Links References Suggestions

Nomenclature

Standard name

NudH product

Synonyms

nucleotide hydrolase product[1], B2830 product[2][1], NudH product[2][1], YgdP product[2][1]

Product description

putative invasion protein[2][3]

EC number (for enzymes)
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Notes

Function

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Gene Ontology

Qualifier GO ID GO term name Reference(s) Evidence Code with/from Aspect Notes Status

GO:0005737

cytoplasm

C

Seeded from Riley et al 2006 [1].

required fields missing

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Interactions

Partner Type Partner Notes
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Notes

Localization

Compartment Description Evidence Notes
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Notes

Structure and Physical Properties

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Physical Properties

Sequence

at EcoCyc 

MIDDDGYRPN VGIVICNRQG QVMWARRFGQ HSWQFPQGGI NPGESAEQAM YRELFEEVGL
SRKDVRILAS TRNWLRYKLP KRLVRWDTKP VCIGQKQKWF LLQLVSGDAE INMQTSSTPE
FDGWRWVSYW YPVRQVVSFK RDVYRRVMKE FASVVMSLQE NTPKPQNASA YRRKRG
Mol. Wt

20.79 kDa (calc) [2]

pI
Extinction coefficient

54430 - 54680 (calc based on 7 Y, 8 W, and 2 C residues)

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Domains/Motifs/Modification Sites

Type Residues Description Notes
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Structure

Structure Type Organism Accession Residues covered Notes
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Notes

Gene Product Resources

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Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:G7459-MONOMER

UniProt (EcoliWiki Page)

UniProt:P0A776

PFAM (EcoliWiki Page)

PFAM:PF00293

RefSeq (EcoliWiki Page)

RefSeq:NP_417307

ModBase (EcoliWiki Page)

ModBase:P0A776

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Notes

Links

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Name URL Comments
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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7


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