ykfG:Gene Product(s): Difference between revisions

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{{Tab|Quickview|ykfG}}{{Tab|Gene|ykfG}}{{Tab On|Gene Product(s)|ykfG}}{{Tab|Expression|ykfG}}{{Tab|Evolution|ykfG}}{{Tab|On One Page|ykfG}}{{TabsBottom}}
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==Nomenclature==
==Nomenclature==
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!{{table heading style}} |Synonyms
!{{table heading style}} |Synonyms
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CP4-6 prophage; predicted DNA repair protein<ref name='LIB:Riley_2006'/>, B0247<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YkfG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
CP4-6 prophage; predicted DNA repair protein product<ref name='LIB:Riley_2006'/>, B0247 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YkfG product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!{{table heading style}} |Product description
!{{table heading style}} |Product description
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==Function==
==Function==
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===Gene Ontology===
<big>'''Gene Ontology'''</big>
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!Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
!Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
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===Interactions===
 
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<span id="Interactions"></span><big>'''Interactions'''</big>
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===Notes===
===Notes===


==Localization==
==Localization==
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!Compartment!!Description!!Evidence!!Notes
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===Notes===
===Notes===


==Structure and Physical Properties==
==Structure and Physical Properties==
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===Physical Properties===
<span id="Sequence"></span><big>'''Physical Properties'''</big>
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8480 (calc based on 2 Y, 1 W, and 0 C residues)  
8480 (calc based on 2 Y, 1 W, and 0 C residues)  
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===Domains/Motifs/Modification Sites===
 
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<big>'''Domains/Motifs/Modification Sites'''</big>
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{|class = 'sortable' {{Prettytable}} id='33224'  
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!Type!!Residues!!Description!!Notes
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===Structure===


<span id="Structure"></span><big>'''Structure'''</big>
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!Structure Type!!Organism!!Accession!!Residues covered!!Notes
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==Gene Product Resources==
==Gene Product Resources==
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===Notes===
===Notes===


==Accessions in Other Databases==
==Accessions in Other Databases==
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==Links==
==Links==
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==References==
==References==
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Revision as of 06:49, 28 July 2007

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Function Interactions Localization Sequence Structure Resources Accessions Links References Suggestions

Nomenclature

Standard name

YkfG product

Synonyms

CP4-6 prophage; predicted DNA repair protein product[1], B0247 product[2][1], YkfG product[2][1]

Product description

putative DNA repair protein[2]; CP4-6 prophage; predicted DNA repair protein[3]

EC number (for enzymes)
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Notes

Function

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Gene Ontology

Qualifier GO ID GO term name Reference(s) Evidence Code with/from Aspect Notes Status
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Interactions

Partner Type Partner Notes
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Notes

Localization

Compartment Description Evidence Notes
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Notes

Structure and Physical Properties

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Physical Properties

Sequence

at EcoCyc 

MKQLSFLPGE MTPQDRRLIQ RALRALDRHL HEPGVAFTST HAVREWLRLH MAALEREEFR
VLYLDNQNQL IAHETLFTGT INRTEVHPRE VVKRALHFNA AAVILAHNHP SGETTPSQAD
KTLTQRLVQV LQLVDIRVPD HLIVGGRQIY SFAEHGLL
Mol. Wt

18.1 kDa (calc) [2]

pI
Extinction coefficient

8480 (calc based on 2 Y, 1 W, and 0 C residues)

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Domains/Motifs/Modification Sites

Type Residues Description Notes
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Structure

Structure Type Organism Accession Residues covered Notes
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Notes

Gene Product Resources

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Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:G6122-MONOMER

UniProt (EcoliWiki Page)

UniProt:Q47685

PFAM (EcoliWiki Page)

PFAM:PF04002

RefSeq (EcoliWiki Page)

RefSeq:NP_414781

ECOO157CYC (EcoliWiki Page)

ECOO157CYC:Z1657-MONOMER

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Notes

Links

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Name URL Comments
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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7


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