pfkA:Evolution: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
imported>WikiEntryBot
Automated import of articles
imported>WikiEntryBot
Automated import of articles
Line 23: Line 23:
{{BacktoTop}}
{{BacktoTop}}
<!--box uid=421aa90e079fa326b6494f812ad13e79.51801.W46ac0f2a5d7b8-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.51801.W46ac0f2a5d7b8-->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. *** -->
<!--
******************************************************************************************
*
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
*
****************************************************************************************** -->
{|class = 'sortable' {{Prettytable}} id='213628'  
{|class = 'sortable' {{Prettytable}} id='213628'  
|- {{table heading style}}
|- {{table heading style}}
Line 256: Line 261:
|
|
From SHIGELLACYC  
From SHIGELLACYC  
|-
|
''E. coli'' O157
|
PFKA
|
From ECOO157CYC
|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79.51801.W46ac0f2a5d7b8&page=51801&pagename={{FULLPAGENAMEE}} edit table] || ||
|[{{SERVER}}/colipedia/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.51801.W46ac0f2a5d7b8&page=51801&pagename={{FULLPAGENAMEE}} edit table] || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.51801.W46ac0f2a5d7b8-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.51801.W46ac0f2a5d7b8-->
Line 275: Line 287:
{{BacktoTop}}
{{BacktoTop}}
<!--box uid=421aa90e079fa326b6494f812ad13e79.51801.O46ac0f5d07230-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.51801.O46ac0f5d07230-->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. *** -->
<!--
******************************************************************************************
*
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
*
****************************************************************************************** -->
{|class = 'sortable' {{Prettytable}} id='213629'  
{|class = 'sortable' {{Prettytable}} id='213629'  
|- {{table_heading_style}}
|- {{table_heading_style}}
Line 287: Line 304:
   
   
|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79.51801.O46ac0f5d07230&page=51801&pagename={{FULLPAGENAMEE}} edit table] || ||
|[{{SERVER}}/colipedia/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.51801.O46ac0f5d07230&page=51801&pagename={{FULLPAGENAMEE}} edit table] || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.51801.O46ac0f5d07230-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.51801.O46ac0f5d07230-->
Line 298: Line 315:
{{BacktoTop}}
{{BacktoTop}}
<!--box uid=421aa90e079fa326b6494f812ad13e79.51801.N46a84b3cf13a9-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.51801.N46a84b3cf13a9-->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. *** -->
<!--
******************************************************************************************
*
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
*
****************************************************************************************** -->
{|class = 'sortable' {{Prettytable}} id='115785'  
{|class = 'sortable' {{Prettytable}} id='115785'  
|- {{table_heading_style}}
|- {{table_heading_style}}
!Name!!URL!!Comments
!Name!!URL!!Comments
|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79.51801.N46a84b3cf13a9&page=51801&pagename={{FULLPAGENAMEE}} edit table] || ||
|[{{SERVER}}/colipedia/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.51801.N46a84b3cf13a9&page=51801&pagename={{FULLPAGENAMEE}} edit table] || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.51801.N46a84b3cf13a9-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.51801.N46a84b3cf13a9-->
Line 314: Line 336:
<noinclude>
<noinclude>
__NOTOC__
__NOTOC__
[[Category:Genes with homologs in Anopheles gambiae ]][[Category:Genes with homologs in Apis mellifera ]][[Category:Genes with homologs in Arabidopsis thaliana ]][[Category:Genes with homologs in Bos taurus ]][[Category:Genes with homologs in Caenorhabditis briggsae ]][[Category:Genes with homologs in Caenorhabditis elegans ]][[Category:Genes with homologs in Canis familiaris ]][[Category:Genes with homologs in Ciona intestinalis ]][[Category:Genes with homologs in Danio rerio ]][[Category:Genes with homologs in Dictyostelium discoideum ]][[Category:Genes with homologs in Drosophila melanogaster ]][[Category:Genes with homologs in Drosophila pseudoobscura ]][[Category:Genes with homologs in Gallus gallus ]][[Category:Genes with homologs in Homo sapiens ]][[Category:Genes with homologs in Macaca mulatta ]][[Category:Genes with homologs in Monodelphis domestica ]][[Category:Genes with homologs in Mus musculus ]][[Category:Genes with homologs in Oryza gramene ]][[Category:Genes with homologs in Pan troglodytes ]][[Category:Genes with homologs in Rattus norvegicus ]][[Category:Genes with homologs in Saccharomyces cerevisiae ]][[Category:Genes with homologs in Schizosaccharomyces pombe ]][[Category:Genes with homologs in Takifugu rubripes ]][[Category:Genes with homologs in Tetraodon nigroviridis ]][[Category:Genes with homologs in Xenopus tropicalis ]][[Category:Genes with homologs in Shigella flexneri ]][[Category:Genes with homologs in E. coli O157]]</noinclude>
</noinclude>
===Categories===
{{BacktoTop}}
[[Category:Genes with homologs in Anopheles gambiae ]]
[[Category:Genes with homologs in Apis mellifera ]]
[[Category:Genes with homologs in Arabidopsis thaliana ]]
[[Category:Genes with homologs in Bos taurus ]]
[[Category:Genes with homologs in Caenorhabditis briggsae ]]
[[Category:Genes with homologs in Caenorhabditis elegans ]]
[[Category:Genes with homologs in Canis familiaris ]]
[[Category:Genes with homologs in Ciona intestinalis ]]
[[Category:Genes with homologs in Danio rerio ]]
[[Category:Genes with homologs in Dictyostelium discoideum ]]
[[Category:Genes with homologs in Drosophila melanogaster ]]
[[Category:Genes with homologs in Drosophila pseudoobscura ]]
[[Category:Genes with homologs in Gallus gallus ]]
[[Category:Genes with homologs in Homo sapiens ]]
[[Category:Genes with homologs in Macaca mulatta ]]
[[Category:Genes with homologs in Monodelphis domestica ]]
[[Category:Genes with homologs in Mus musculus ]]
[[Category:Genes with homologs in Oryza gramene ]]
[[Category:Genes with homologs in Pan troglodytes ]]
[[Category:Genes with homologs in Rattus norvegicus ]]
[[Category:Genes with homologs in Saccharomyces cerevisiae ]]
[[Category:Genes with homologs in Schizosaccharomyces pombe ]]
[[Category:Genes with homologs in Takifugu rubripes ]]
[[Category:Genes with homologs in Tetraodon nigroviridis ]]
[[Category:Genes with homologs in Xenopus tropicalis ]]
[[Category:Genes with homologs in Shigella flexneri ]]
[[Category:Genes with homologs in E. coli O157]]

Revision as of 00:42, 3 August 2007

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

[back to top]


Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000025715 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000012688 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT4G26270 (score: 1.000; bootstrap: 84%)
  • AT5G56630 (score: 0.868)
  • AT4G29220 (score: 0.747)
  • AT4G32840 (score: 0.707)
  • AT5G61580 (score: 0.655)
  • AT5G47810 (score: 0.416)
  • AT2G22480 (score: 0.340)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000003472 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000000358 (score: 0.670)
  • ENSBTAP00000014086 (score: 0.624)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00025167 (score: 1.000; bootstrap: 100%)
  • WBGene00038394 (score: 0.251)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00022199 (score: 1.000; bootstrap: 100%)
  • WBGene00008230 (score: 0.254)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000013277 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000016138 (score: 0.643)
  • ENSCAFP00000008221 (score: 0.625)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000009557 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-040912-135 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040912-137 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0191364 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0003071 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA17840-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000011230 (score: 1.000; bootstrap: 100%)
  • ENSGALP00000010557 (score: 0.543)
  • ENSGALP00000021650 (score: 0.207)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000263145 (score: 1.000; bootstrap: 100%)
  • ENSP00000352842 (score: 0.679)
  • ENSP00000309438 (score: 0.633)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000002741 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000006549 (score: 0.609)
  • ENSMMUP00000005583 (score: 0.460)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000008095 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000003803 (score: 0.411)

From Inparanoid:20070104

Mus musculus

  • MGI:97548 (score: 1.000; bootstrap: 100%)
  • MGI:97547 (score: 0.677)
  • MGI:1891833 (score: 0.664)

From Inparanoid:20070104

Oryza gramene

  • Q5JNC6 (score: 1.000; bootstrap: 86%)
  • Q65X97 (score: 1.000; bootstrap: 85%)
  • Q5SNH5 (score: 0.603)
  • Q6L4N6 (score: 0.582)
  • Q5VMJ5 (score: 0.571)
  • Q69QS5 (score: 0.350)
  • Q7FB09 (score: 0.281)
  • Q6EQ16 (score: 0.274)
  • Q6Z522 (score: 0.265)
  • Q948J0 (score: 0.225)
  • Q7XEV3 (score: 0.225)
  • Q7X9K2 (score: 0.078)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000042531 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000003790 (score: 0.671)
  • ENSPTRP00000039186 (score: 0.407)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000013374 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000001625 (score: 0.679)
  • ENSRNOP00000023252 (score: 0.651)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YGR240C (score: 1.000; bootstrap: 100%)
  • YMR205C (score: 0.376)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPBC16H52 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000173592 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000162597 (score: 0.838)
  • NEWSINFRUP00000181382 (score: 0.581)
  • NEWSINFRUP00000145340 (score: 0.543)
  • NEWSINFRUP00000178137 (score: 0.292)
  • NEWSINFRUP00000130965 (score: 0.064)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00015248001 (score: 1.000; bootstrap: 83%)
  • GSTENP00016608001 (score: 0.573)
  • GSTENP00028145001 (score: 0.417)
  • GSTENP00030519001 (score: 0.290)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000015829 (score: 1.000; bootstrap: 100%)
  • ENSXETP00000047469 (score: 0.626)

From Inparanoid:20070104

Shigella flexneri

PFKA

From SHIGELLACYC

E. coli O157

PFKA

From ECOO157CYC

edit table

See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Do-It-Yourself Web Tools


Notes

Families

[back to top]


Database Accession Notes

PFAM (EcoliWiki Page)

PFAM:PF00365

edit table

See Help:Evolution_families for help entering or editing information in this section of EcoliWiki.

Notes

Links

[back to top]


Name URL Comments
edit table

See Help:Links_table for how to enter or edit information in this section of EcoliWiki.

References

[back to top]


See Help:References for how to manage references in EcoliWiki.



Categories

[back to top]