tilS:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK0187, b0188, JW0183, mesJ, yaeN''<ref name='LIB:Riley_2006'/>
''ECK0187, b0188, JW0183, mesJ, yaeN''<ref name='LIB:Riley_2006'/>, yaeN''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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tRNA(Ile)-lysidine synthetase<ref name='LIB:Riley_2006'/>, B0188<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YaeN<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MesJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TilS<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''tRNA(Ile)-lysidine synthetase<ref name='LIB:Riley_2006'/>, B0188<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YaeN<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MesJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TilS<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0187, JW0183, mesJ, yaeN, b0188''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://porteco.org/AjaxSearch.jsp?searchString=tilS&s=search PortEco search(tilS)]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_dna.php?gene=tilS&loc=MG1655:212331..213629,W3110:212331..213629,DH10B:186435..187733,REL606:215173..216471,BW2952:212330..213628 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=212330&end=213628&gene=tilS&aa= Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=tilS+AND+escherichia+coli Pubmed(tilS)]&nbsp;&nbsp;&nbsp; [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=tilS Textpresso(tilS)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=tilS&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6096]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002716&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=tilS&loc=MG1655%3A212331..213629,W3110%3A212331..213629,DH10B%3A186435..187733,REL606%3A215173..216471,BW2952%3A212330..213628]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=212330&end=213628&gene=tilS&aa=mtltlnrqlltsrqilvafsggldstvllhqlvqwrtenpgvalraihvhhglsanadawvthcenvcqqwqvplvvervqlaqeglgieaqarqaryqafartllpgevlvtaqhlddqcetfllalkrgsgpaglsamaevsefagtrlirpllartrgelvqwarqydlrwiedesnqddsydrnflrlrvvpllqqrwphfaeatarsaalcaeqeslldelladdlahcqspqgtlqivpmlamsdarraaiirrwlagqnapmpsrdalvriwqevalaredaspclrlgafeirryqsqlwwiksvtgqsenivpwqtwlqplelpaglgsvqlnaggdirppradeavsvrfkapgllhivgrnggrklkkiwqelgvppwlrdttpllfygetliaaagvfvtqegvaegengvsfvwqktls]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=tilS+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=tilS]]&nbsp;&nbsp;


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Latest revision as of 21:45, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

tilS

Gene Synonym(s)

ECK0187, b0188, JW0183, mesJ, yaeN[1], yaeN

Product Desc.

G6096[2][3]

tRNA(Ile) lysidine (L34) synthase, ATP-dependent; solely responsible for tRNA(Ile) lysidine 34 (L34) formation[4]

Product Synonyms(s)

tRNA(Ile)-lysidine synthetase[1], B0188[2][1], YaeN[2][1], MesJ[2][1], TilS[2][1] , ECK0187, JW0183, mesJ, yaeN, b0188

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): tilS[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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YaeN (TilS) is mistakenly labeled as a cell cycle gene in many databases. the confusion arose from the misinterpretation of Genbank Z50870. the real "minE suppressor" is the small rof gene next to tilS, labeled as orf4 in Z50870. PDB: 1NI5. Gu M., Burling T., Lima C.D., Structure of the MesJ PP-ATPase from Escherichia coli, unpublished. tilS is an essential gene. AFMB Structural Genomics target No. 121 (http://afmb.cnrs-mrs.fr/article171.html).[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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