rhlE:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK0786, b0797, JW0781''<ref name='LIB:Riley_2006'/>
''ECK0786, b0797, JW0781''<ref name='LIB:Riley_2006'/>, JW0781''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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RNA helicase<ref name='LIB:Riley_2006'/>, B0797<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RhlE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''RNA helicase<ref name='LIB:Riley_2006'/>, B0797<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RhlE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0786, JW0781, b0797''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://porteco.org/AjaxSearch.jsp?searchString=rhlE&s=search PortEco search(rhlE)]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_dna.php?gene=rhlE&loc=MG1655:830095..831459,W3110:831294..832658,DH10B:884023..885387,REL606:823497..824861,BW2952:733063..734427 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=733063&end=734427&gene=rhlE&aa= Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rhlE+AND+escherichia+coli Pubmed(rhlE)]&nbsp;&nbsp;&nbsp; [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=rhlE Textpresso(rhlE)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=rhlE&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11235]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001213&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=rhlE&loc=MG1655%3A830095..831459,W3110%3A831294..832658,DH10B%3A884023..885387,REL606%3A823497..824861,BW2952%3A733063..734427]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=733063&end=734427&gene=rhlE&aa=msfdslglspdilravaeqgyreptpiqqqaipavlegrdlmasaqtgtgktagftlpllqhlitrqphakgrrpvraliltptrelaaqigenvrdyskylnirslvvfggvsinpqmmklrggvdvlvatpgrlldlehqnavkldqveilvldeadrmldmgfihdirrvltklpakrqnllfsatfsddikalaekllhnpleievarrntasdqvtqhvhfvdkkrkrellshmigkgnwqqvlvftrtkhganhlaeqlnkdgirsaaihgnksqgartraladfksgdirvlvatdiaargldieelphvvnyelpnvpedyvhrigrtgraaatgealslvcvdehkllrdiekllkkeipriaipgyepdpsikaepiqngrqqrggggrgqgggrgqqqprrgeggaksasakpaekpsrrlgdakpageqqrrrrprkpaaaq]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rhlE+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=rhlE]]&nbsp;&nbsp;


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Latest revision as of 21:55, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

rhlE

Gene Synonym(s)

ECK0786, b0797, JW0781[1], JW0781

Product Desc.

DEAD-box-containing ATP-dependent RNA helicase family member[2][3]

DEAD-box protein family; ATP-dependent RNA helicase-like protein[4]

Product Synonyms(s)

RNA helicase[1], B0797[2][1], RhlE[2][1] , ECK0786, JW0781, b0797

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): rhlE[2]

Regulation/Activity
Quick Links



        

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Notes

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rhlE is transiently after a cold shock, dependent on the presence of PNPase. RhlE binds RNaseE. RhlE forms degradosome.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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