iscU:Evolution: Difference between revisions

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[[EcoCyc]]
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EcoCyc:G7324
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG13395
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120003896
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB3176
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0008321
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:34, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000010440 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000013507 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT4G22220 (score: 1.000; bootstrap: 100%)
  • AT4G04080 (score: 0.362)
  • AT3G01020 (score: 0.340)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000015648 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000038231 (score: 0.886)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00040948 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00012885 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000016673 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-040724-113 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040801-164 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-050417-333 (score: 0.402)
  • ZDB-GENE-050417-332 (score: 0.402)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0185317 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0037637 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA22065-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000007760 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000310623 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000022531 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000007771 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000003441 (score: 0.208)

From Inparanoid:20070104

Mus musculus

  • MGI:1913633 (score: 1.000; bootstrap: 100%)
  • MGI:3644508 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • Q6AUN9 (score: 1.000; bootstrap: 100%)
  • Q8LR34 (score: 0.497)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000009169 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000000890 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YOR226C (score: 1.000; bootstrap: 100%)
  • YPL135W (score: 0.394)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPAC2273c (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000145766 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000155113 (score: 0.250)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00029503001 (score: 1.000; bootstrap: 100%)
  • GSTENP00017271001 (score: 0.371)

From Inparanoid:20070104

Shigella flexneri

S2748

From SHIGELLACYC

E. coli O157

Z3796

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF01592 NifU-like N terminal domain

Panther (EcoliWiki Page)

PTHR10093:SF0

Superfamily (EcoliWiki Page)

SUPERFAMILY:82649

EcoCyc

EcoCyc:G7324

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG13395

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120003896

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB3176

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0008321

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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