iclR:Quickview: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older edit
/Volumes/r3/t3/ul/phpwikibots/trunk/touch_all_tables.php
touch
 
Line 23: Line 23:
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  
*  
****************************************************************************************** -->{{Quickview_table_help}}
****************************************************************************************** -->
{|  id="A49aee9c23eda6"  class=" tableEdit New_Quickview_Table"   
{|  id="A49aee9c23eda6"  class=" tableEdit New_Quickview_Table"   


Line 33: Line 33:
!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
||
||
''ECK4010, b4018, JW3978''<ref name='LIB:Riley_2006'/>
''ECK4010, b4018, JW3978''<ref name='LIB:Riley_2006'/>, JW3978''
|-
|-
!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
Line 43: Line 43:
!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
||
||
DNA-binding transcriptional repressor<ref name='LIB:Riley_2006'/>, B4018<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, IclR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, acetate operon repressor<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''DNA-binding transcriptional repressor<ref name='LIB:Riley_2006'/>, B4018<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, IclR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, acetate operon repressor<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK4010, JW3978, b4018''
|-
|-
!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
Line 63: Line 63:
!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
||
||
[http://porteco.org/AjaxSearch.jsp?searchString=iclR&s=search PortEco search(iclR)]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_dna.php?gene=iclR&loc=MG1655:4221651..4220827,W3110:4227218..4226394,REL606:4202559..4201735,DH10B:4321347..4320523,BW2952:4110507..4111331 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4110507&end=4111331&gene=iclR&aa= Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=iclR+AND+escherichia+coli Pubmed(iclR)]&nbsp;&nbsp;&nbsp; [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=iclR Textpresso(iclR)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=iclR&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10491]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000484&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=iclR&loc=MG1655%3A4221651..4220827,W3110%3A4227218..4226394,REL606%3A4202559..4201735,DH10B%3A4321347..4320523,BW2952%3A4110507..4111331]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4110507&end=4111331&gene=iclR&aa=mkmistiqkketvmvapipakrgrkpavatapatgqvqsltrglkllewiaesngsvaltelaqqaglpnstthrllttmqqqgfvrqvgelghwaigahafmvgssflqsrnllaivhpilrnlmeesgetvnmavldqsdheaiiidqvqcthlmrmsapiggklpmhasgagkaflaqlseeqvtkllhrkglhaythatlvspvhlkedlaqtrkrgysfddeehalglrclaacifdehrepfaaisisgpisritddrvtefgamvikaakevtlayggmr]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=iclR+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=iclR]]&nbsp;&nbsp;


|- class="tableEdit_footer"  
|- class="tableEdit_footer"  

Latest revision as of 21:49, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

iclR

Gene Synonym(s)

ECK4010, b4018, JW3978[1], JW3978

Product Desc.

IclR transcriptional repressor[2][3]

Repressor of aceBA operon[4]

Product Synonyms(s)

DNA-binding transcriptional repressor[1], B4018[2][1], IclR[2][1], acetate operon repressor[2][1] , ECK4010, JW3978, b4018

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): iclR[2]

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


Tetrameric IclR binds to the aceBA operator and dimeric IclR is inactive. Glyoxylate dissociates IclR and favors dimers; pyruvate promotes binding and favors tetramers (Lorca, 2007).[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=iclR:Quickview&oldid=1396748"