degP:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK0160, b0161, JW0157, htrA, ptd''<ref name='LIB:Riley_2006'/>
''ECK0160, b0161, JW0157, htrA, ptd''<ref name='LIB:Riley_2006'/>, ptd''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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serine endoprotease (protease Do), membrane-associated<ref name='LIB:Riley_2006'/>, B0161<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Ptd<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, protease Do<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HtrA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''serine endoprotease (protease Do), membrane-associated<ref name='LIB:Riley_2006'/>, B0161<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Ptd<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, protease Do<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HtrA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0160, htrA, JW0157, ptd, b0161''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://porteco.org/AjaxSearch.jsp?searchString=degP&s=search PortEco search(degP)]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_dna.php?gene=degP&loc=MG1655:180884..182308,W3110:180884..182308,DH10B:154988..156412,REL606:183726..185150,BW2952:180883..182307 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=180883&end=182307&gene=degP&aa= Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=degP+AND+escherichia+coli Pubmed(degP)]&nbsp;&nbsp;&nbsp; [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=degP Textpresso(degP)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=degP&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10463]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000456&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=degP&loc=MG1655%3A180884..182308,W3110%3A180884..182308,DH10B%3A154988..156412,REL606%3A183726..185150,BW2952%3A180883..182307]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=180883&end=182307&gene=degP&aa=mkkttlalsalalslglalsplsataaetssattaqqmpslapmlekvmpsvvsinvegsttvntprmprnfqqffgddspfcqegspfqsspfcqggqggngggqqqkfmalgsgviidadkgyvvtnnhvvdnatvikvqlsdgrkfdakmvgkdprsdialiqiqnpknltaikmadsdalrvgdytvaignpfglgetvtsgivsalgrsglnaenyenfiqtdaainrgnsggalvnlngeligintailapdggnigigfaipsnmvknltsqmveygqvkrgelgimgtelnselakamkvdaqrgafvsqvlpnssaakagikagdvitslngkpissfaalraqvgtmpvgskltlgllrdgkqvnvnlelqqssqnqvdsssifngiegaemsnkgkdqgvvvnnvktgtpaaqiglkkgdviiganqqavkniaelrkvldskpsvlalniqrgdstiyllmq]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=degP+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=degP]]&nbsp;&nbsp;


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Latest revision as of 21:51, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

degP

Gene Synonym(s)

ECK0160, b0161, JW0157, htrA, ptd[1], ptd

Product Desc.

DegP[2][3];

Component of serine protease Do[3]

Periplasmic, membrane-associated serine endoprotease; protease Do, required for high-temperature growth and the degradation of damaged proteins[4]

Product Synonyms(s)

serine endoprotease (protease Do), membrane-associated[1], B0161[2][1], Ptd[2][1], protease Do[2][1], HtrA[2][1] , ECK0160, htrA, JW0157, ptd, b0161

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): degP[2], htrA

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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Autocleavage occurs after Cys95(Cys69 of mature form) or Gln108 (Gln82 of mature form). Autocleavage causes hexameric DegP(HtrA) to dissociate into proteolytically active monomers. Targeted to some proteins by CpxP. Sigma E promoter. Mutants have elevated OM vesiculation (McBroom, 2006). DegP(HtrA) has chaperone activity (Skorko-Glonek, 2007).[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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