basR:Quickview: Difference between revisions
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[http://porteco.org/AjaxSearch.jsp?searchString=basR&s=search PortEco search(basR)] [http://ecoliwiki.net/tools/display_dna.php?gene=basR&loc=MG1655:4331973..4331305,W3110:4338628..4337960,DH10B:4432335..4431667,REL606:4312664..4311996,BW2952:4270040..4270708 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4270040&end=4270708&gene=basR&aa=mkiliveddtlllqglilaaqtegyacdsvttarmaeqsleaghyslvvldlglpdedglhflarirqkkytlpvliltardtltdkiagldvgaddylvkpfaleelharirallrrhnnqgeselivgnltlnmgrrqvwmggeeliltpkeyallsrlmlkagspvhreilyndiynwdnepstntlevhihnlrdkvgkarirtvrgfgymlvaneen Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=basR+AND+escherichia+coli Pubmed(basR)] [http:// | [http://porteco.org/AjaxSearch.jsp?searchString=basR&s=search PortEco search(basR)] [http://ecoliwiki.net/tools/display_dna.php?gene=basR&loc=MG1655:4331973..4331305,W3110:4338628..4337960,DH10B:4432335..4431667,REL606:4312664..4311996,BW2952:4270040..4270708 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4270040&end=4270708&gene=basR&aa=mkiliveddtlllqglilaaqtegyacdsvttarmaeqsleaghyslvvldlglpdedglhflarirqkkytlpvliltardtltdkiagldvgaddylvkpfaleelharirallrrhnnqgeselivgnltlnmgrrqvwmggeeliltpkeyallsrlmlkagspvhreilyndiynwdnepstntlevhihnlrdkvgkarirtvrgfgymlvaneen Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=basR+AND+escherichia+coli Pubmed(basR)] [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=basR Textpresso(basR)] | ||
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Revision as of 18:10, 27 June 2011
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
basR |
|---|---|
| Gene Synonym(s) |
ECK4106, b4113, JW4074, pmrA[1] |
| Product Desc. |
DNA-binding response regulator in two-component regulatory system with BasS[1] Response regulator for Lipid A modification genes; two-component system involved in polymyxin resistance that senses high extracellular Fe(2+)[2] |
| Product Synonyms(s) | |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links |
PortEco search(basR) DNA display Protein display Pubmed(basR) Textpresso(basR) |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
BasS is the cognate sensor protein of the BasSR two-component system. Constitutive allele basR53 (pmrA53) confers polymyxin B resistance and deoxycholate hypersensitivity. EvgAS regulon. BasSR confers resistance to Fe(III)-mediated killing.The BasSR regulon has been primarily characterized in Salmonella; unlike E. coli, Salmonella also activates PmrAB(BasSR) in low Mg(2+), mediated by PhoPQ and the PmrD protein.[2]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
- ↑ 3.0 3.1 3.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7