queC:Quickview: Difference between revisions

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[http://ecoliwiki.net/tools/display_dna.php?gene=queC&loc=MG1655:464771..464076,W3110:464771..464076,DH10B:404102..403407,REL606:436919..437614 DNA display]    [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=436919&end=437614&gene=queC&aa=mkravvvfsggqdsttclvqalqqydevhcvtfdygqrhraeidvarelalklgarahkvldvtllnelavssltrdsipvpdyepeadgipntfvpgrnilfltlaaiyayqvkaeavitgvcetdfsgypdcrdefvkalnhavslgmakdirfetplmwidkaetwaladyygkldlvrnetltcyngfkgdgcghcaacnlranglnhyladkptvmaamkqktglr Protein display]    [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=queC+AND+escherichia+coli Pubmed(queC)]    [http://trimer.tamu.edu/cgi-bin/textpresso/dev/search?q=queC Textpresso(queC)]
[http://ecoliwiki.net/tools/display_dna.php?gene=queC&loc=MG1655:464771..464076,W3110:464771..464076,DH10B:404102..403407,REL606:436919..437614,BW2952:366835..367530 DNA display]    [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=366835&end=367530&gene=queC&aa=mkravvvfsggqdsttclvqalqqydevhcvtfdygqrhraeidvarelalklgarahkvldvtllnelavssltrdsipvpdyepeadgipntfvpgrnilfltlaaiyayqvkaeavitgvcetdfsgypdcrdefvkalnhavslgmakdirfetplmwidkaetwaladyygkldlvrnetltcyngfkgdgcghcaacnlranglnhyladkptvmaamkqktglr Protein display]    [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=queC+AND+escherichia+coli Pubmed(queC)]    [http://trimer.tamu.edu/cgi-bin/textpresso/search?q=queC Textpresso(queC)]


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Revision as of 15:44, 12 April 2011

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

queC

Gene Synonym(s)

ybaX, ECK0438, b0444, JW0434[1][2]

Product Desc.

enzyme in preQ0 biosynthesis [2][3]

Required for 7-cyano-7-deazaguanine (preQ0) synthesis; queuosine biosynthesis, step 1[4]

Product Synonyms(s)

predicted aluminum resistance protein[1], B0444[2][1], YbaX[2][1], QueC[2][1]

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ybaX[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(queC)    Textpresso(queC)

See Help:Quickview for help with entering information in the Quickview table.

Notes

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Asn, Asp, Tyr, and His tRNA anticodons are modified. A. viscosus ortholog ALU1 confers aluminum tolerance when cloned in E. coli (Jo, 1997). COG0603 predicts ATPase activity. AFMB Structural Genomics target No. 25 (http://afmb.cnrs-mrs.fr/article171.html). tgt mutants lack queuosine and are have reduced survival in stationary phase. (Noguchi, 1982).[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.