Cis Element:dif: Difference between revisions

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Table edited by Azweifel via TableEdit
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|-
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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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<i>dif</i>
<i>dif</i>
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!align=left |Synonyms
!align=left {{table_heading_style}} |Synonyms
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deletion-induced filamentation
deletion-induced filamentation
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!align=left |Function
!align=left {{table_heading_style}} |Function
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Recombination site in terminus
Recombination site in terminus
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!align=left |Location
!align=left {{table_heading_style}} |Location
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34.2 minutes in MG1655
34.2 minutes in MG1655
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!align=left |SO terms
!align=left {{table_heading_style}} |SO terms
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!|Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links
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!|Allele!!Nt change(s)!!Phenotype: Type!!Phenotype: Description!!Reference!!Availability!!Comments
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!|Resource!!Resource Type!!Source!!Notes/Reference
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!|Database!!Accession!!Notes
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Revision as of 16:35, 17 June 2010

Cis element summary table

Standard Name

dif

Synonyms

deletion-induced filamentation

Function

Recombination site in terminus

Location

34.2 minutes in MG1655

SO terms


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Notes

Location and Sequence

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See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

Strain Map location Genome coordinates Genome browsers Sequence links

MG1655

34.2 minutes

MG1655: 1588774..1588801
gbrowse_img.php?coord=1588774..1588801&genome=ecoli&name=MG1655&trackset=DNA_unlabeled&width=300&.png

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Notes

The site is a 28bp sequence located in the "dif activity zone" (DAZ).

Interactions

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See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

Protein

XerC

PMID:11114887[1]

Protein

XerD

PMID:11114887[1]


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Notes

Mutant alleles and phenotypes

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Allele Nt change(s) Phenotype: Type Phenotype: Description Reference Availability Comments
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Notes

Genetic Resources

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See Help:Gene_resources for help entering information into the Genetic Resources table.

Resource Resource Type Source Notes/Reference
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Notes

Accessions

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

eric

dif


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Notes

References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 Barre, FX et al. (2000) FtsK functions in the processing of a Holliday junction intermediate during bacterial chromosome segregation. Genes Dev. 14 2976-88 PubMed

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