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!align=left {{table_heading_style}} |Standard Name
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''ybaK''  
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=ybaK&loc=MG1655:506306..505827,W3110:506306..505827,DH10B:445637..445158,REL606:479149..478670 DNA display]    [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=479149&end=478670&gene=ybaK&aa=mtpavklleknkisfqihtyehdpaetnfgdevvkklglnpdqvyktllvavngdmkhlavavtpvagqldlkkvakalgakkvemadpmvaqrstgylvggisplgqkkrlptiidapaqefatiyvsggkrgldielaagdlakildakfadiarrd Protein display]    [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ybaK+AND+escherichia+coli Pubmed(ybaK)]    [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=ybaK Textpresso(ybaK)]
[http://ecoliwiki.net/tools/display_dna.php?gene=ybaK&loc=MG1655:506306..505827,W3110:506306..505827,DH10B:445637..445158,REL606:479149..478670 DNA display]    [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=479149&end=478670&gene=ybaK&aa=mtpavklleknkisfqihtyehdpaetnfgdevvkklglnpdqvyktllvavngdmkhlavavtpvagqldlkkvakalgakkvemadpmvaqrstgylvggisplgqkkrlptiidapaqefatiyvsggkrgldielaagdlakildakfadiarrd Protein display]    [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ybaK+AND+escherichia+coli Pubmed(ybaK)]    [http://trimer.tamu.edu/cgi-bin/textpresso/dev/search?q=ybaK Textpresso(ybaK)]


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Revision as of 22:34, 2 March 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

ybaK

Gene Synonym(s)

ECK0475, b0481, JW0470[1]

Product Desc.

Cys-tRNAPro and Cys-tRNACys deacylase[2][3]

Cys-tRNAPro and Cys-tRNACys deacylase, tRNA editing[4]

Product Synonyms(s)

conserved protein[1], B0481[2][1], YbaK[2][1]

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ybaK[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(ybaK)    Textpresso(ybaK)

See Help:Quickview for help with entering information in the Quickview table.

Notes

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YbaK has weak in vitro deacylase activity against Gly-, Ala-, Ser- Pro- and Met-tRNAs. YbaK is homologous to YeaK and an insertion domain in ProS. ybaK is a non-essential gene; YbaK is a low abundance protein. otherPDB (H. influenzae): 1DBU, 1DBX.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.