bsmA:Quickview: Difference between revisions

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<noinclude>{{TabsTop}}   
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{{Tab On|Quickview|yjfO}}{{Tab|Gene|yjfO}}{{Tab|Gene Product(s)|yjfO}}{{Tab|Expression|yjfO}}{{Tab|Evolution|yjfO}}{{Tab|On One Page|yjfO}}{{TabsBottom}}
{{Tab On|Quickview|bsmA}}{{Tab|Gene|bsmA}}{{Tab|Gene Product(s)|bsmA}}{{Tab|Expression|bsmA}}{{Tab|Evolution|bsmA}}{{Tab|On One Page|bsmA}}{{TabsBottom}}
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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''yjfO''  
''bsmA''  
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK4185, b4189, JW5743''<ref name='LIB:Riley_2006'/>
''ECK4185, b4189, JW5743''<ref name='LIB:Riley_2006'/>, yjfO product
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:yjfO|yjfO]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:bsmA|bsmA]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left {{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=yjfO&loc=MG1655:4414793..4414464,W3110:4421450..4421121,DH10B:4515155..4514826,REL606:4394925..4394596 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4394925&end=4394596&gene=yjfO&aa=mvsrkrnsviyrfaslllvlmlsacsalqgtpqpappvtdhpqeirrdqtqglqrigsvstmvrgspddalaeikakavaakadyyvvvmvdetivtgqwysqailyrk Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yjfO+AND+escherichia+coli Pubmed(yjfO)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=yjfO Textpresso(yjfO)]
[http://ecoliwiki.net/tools/display_dna.php?gene=bsmA&loc=MG1655:4414793..4414464,W3110:4421450..4421121,DH10B:4515155..4514826,REL606:4394925..4394596 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4394925&end=4394596&gene=bsmA&aa=mvsrkrnsviyrfaslllvlmlsacsalqgtpqpappvtdhpqeirrdqtqglqrigsvstmvrgspddalaeikakavaakadyyvvvmvdetivtgqwysqailyrk Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=bsmA+AND+escherichia+coli Pubmed(bsmA)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=bsmA Textpresso(bsmA)]


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Revision as of 19:37, 2 March 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

bsmA

Gene Synonym(s)

ECK4185, b4189, JW5743[1], yjfO product

Product Desc.

conserved protein[2][3]

Function unknown lipoprotein, YhcN family, function unknown; Cys conserved[4]

Product Synonyms(s)

conserved protein product[1], B4189 product[2][1], YjfO product[2][1]

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): bsmA[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(bsmA)    Textpresso(bsmA)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


First 24 aa are a predicted type II signal peptide. YjfO is the only one of ten YhcN paralogs that is predicted to have a type II signal peptide; the others have type I signals predicted or verified.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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