mcrB:Quickview: Difference between revisions
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5-methylcytosine-specific restriction enzyme McrBC, subunit McrB product<ref name='LIB:Riley_2006'/>, B4346 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RglB product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, McrB product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | 5-methylcytosine-specific restriction enzyme McrBC, subunit McrB product<ref name='LIB:Riley_2006'/>, B4346 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RglB product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, McrB product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left {{table_heading_style}} |Function from GO | |||
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'''Molecular Function''' | |||
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI]) | |||
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!align=left {{table_heading_style}} |Knock-Out Phenotype | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=mcrB&loc=MG1655:4577360..4575981,W3110:4584017..4582638,REL606:4557282..4555903 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4557282&end=4555903&gene=mcrB&aa=mrkaylmesiqpwiekfikqaqqqrsqstkdyptsyrnlrvklsfgygnftsipwfaflgegqeasngiypvilyykdfdelvlaygisdtnephaqwqfssdipktiaeyfqatsgvypkkygqsyyacsqkvsqgidytrfasmldniindyklifnsgksvippmsktesycledalndlfipettietilkrltikkniilqgppgvgktfvarrlaylltgekapqrvnmvqfhqsysyedfiqgyrpngvgfrrkdgifynfcqqakeqpekkyifiideinranlskvfgevmmlmehdkrgenwsvpltysendeerfyvpenvyiiglmntadrslavvdyalrrrfsfidiepgfdtpqfrnfllnkkaepsfveslcqkmnelnqeiskeatilgkgfrighsyfccgledgtspdtqwlneivmtdiaplleeyffddpykqqkwtnkllgds Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=mcrB+AND+escherichia+coli Pubmed(mcrB)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=mcrB Textpresso(mcrB)] | |||
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Revision as of 23:44, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
mcrB |
|---|---|
| Gene Synonym(s) |
ECK4336, b4346, JW5871, rglB[1] |
| Product Desc. |
McrB subunit of 5-methylcytosine restriction system[2][3]; Component of McrBC restriction endonuclease[3] McrBC restriction endonuclease, catalytic subunit; 5-methylcytosine-specific; requires GTP, inhibited by ATP[4] |
| Product Synonyms(s) |
5-methylcytosine-specific restriction enzyme McrBC, subunit McrB product[1], B4346 product[2][1], RglB product[2][1], McrB product[2][1] |
| Function from GO |
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
McrB-S is an alternative product initiating at codon 162. McrB-S is seen in some overexpression constructs but has not yet been observed as a native protein. McrB-S has no known function.[4]
In vitro, purified McrBs modulates the cleavage activity of McrBC, probably through binding to McrC.[5],
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
- ↑ Panne, D et al. (1998) McrBs, a modulator peptide for McrBC activity. EMBO J. 17 5477-83 PubMed