yifB:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''yifB'' | ''yifB'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK3758, b3765, JW3738''<ref name='LIB:Riley_2006'/> | ''ECK3758, b3765, JW3738''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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predicted ATP-dependent protease<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | predicted ATP-dependent protease<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Competence Mg chelatase ComM homolog, function unknown<ref name='LIB:EcoGene'/> | Competence Mg chelatase ComM homolog, function unknown<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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predicted bifunctional enzyme and transcriptional regulator<ref name='LIB:Riley_2006'/>, B3765<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YifB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | predicted bifunctional enzyme and transcriptional regulator<ref name='LIB:Riley_2006'/>, B3765<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YifB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0004176 ATP-dependent peptidase activity ([http://www.geneontology.org/GO.evidence.shtml ISS]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:yifB|yifB]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:yifB|yifB]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=yifB&loc=MG1655:3948022..3946472,W3110:3686682..3688232,DH10B:4046942..4045392,REL606:3911799..3910249 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3911799&end=3910249&gene=yifB&aa=mhimvtqgglmslsivhtraalgvnappitvevhiskglpgltmvglpettvkeardrvrsaiinsgyeypakkitinlapadlpkeggrydlpiaiallaaseqltankldeyelvgelaltgalrgvpgaissateaiksgrkiivakdnedevglingegcliadhlqavcaflegkhalerpkptdavsralqhdlsdvigqeqgkrgleitaagghnllligppgtgktmlasringllpdlsneealesaailslvnaesvqkqwrqrpfrsphhsasltamvgggaipgpgeislahngvlfldelpeferrtldalrepiesgqihlsrtrakityparfqlvaamnpsptghyqgnhnrctpeqtlrylnrlsgpfldrfdlsleiplpppgilsktvvpgessatvkqrvmaarerqfkrqnklnawldspeirqfcklesedamwlegtlihlglsirawqrllkvartiadidqsdiitrqhlqeavsyraidrllihlqkllt Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yifB+AND+escherichia+coli Pubmed(yifB)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=yifB Textpresso(yifB)] | |||
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Revision as of 22:58, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
yifB |
|---|---|
| Gene Synonym(s) |
ECK3758, b3765, JW3738[1] |
| Product Desc. |
predicted ATP-dependent protease[2][3] Competence Mg chelatase ComM homolog, function unknown[4] |
| Product Synonyms(s) |
predicted bifunctional enzyme and transcriptional regulator[1], B3765[2][1], YifB[2][1] |
| Function from GO |
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
ComM homolog. yifB is predicted to have a CRP-S promoter co-regulated by both Crp and Sxy (Cameron, 2006).[4]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.