ybaK:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''ybaK'' | ''ybaK'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK0475, b0481, JW0470''<ref name='LIB:Riley_2006'/> | ''ECK0475, b0481, JW0470''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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Cys-tRNA<sup>Pro</sup> and Cys-tRNA<sup>Cys</sup> deacylase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | Cys-tRNA<sup>Pro</sup> and Cys-tRNA<sup>Cys</sup> deacylase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Cys-tRNAPro and Cys-tRNACys deacylase, tRNA editing<ref name='LIB:EcoGene'/> | Cys-tRNAPro and Cys-tRNACys deacylase, tRNA editing<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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conserved protein<ref name='LIB:Riley_2006'/>, B0481<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbaK<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | conserved protein<ref name='LIB:Riley_2006'/>, B0481<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbaK<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:ybaK|ybaK]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:ybaK|ybaK]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=ybaK&loc=MG1655:506306..505827,W3110:506306..505827,DH10B:445637..445158,REL606:479149..478670 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=479149&end=478670&gene=ybaK&aa=mtpavklleknkisfqihtyehdpaetnfgdevvkklglnpdqvyktllvavngdmkhlavavtpvagqldlkkvakalgakkvemadpmvaqrstgylvggisplgqkkrlptiidapaqefatiyvsggkrgldielaagdlakildakfadiarrd Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ybaK+AND+escherichia+coli Pubmed(ybaK)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=ybaK Textpresso(ybaK)] | |||
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Revision as of 23:21, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
ybaK |
|---|---|
| Gene Synonym(s) |
ECK0475, b0481, JW0470[1] |
| Product Desc. |
Cys-tRNAPro and Cys-tRNACys deacylase[2][3] Cys-tRNAPro and Cys-tRNACys deacylase, tRNA editing[4] |
| Product Synonyms(s) | |
| Function from GO |
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
YbaK has weak in vitro deacylase activity against Gly-, Ala-, Ser- Pro- and Met-tRNAs. YbaK is homologous to YeaK and an insertion domain in ProS. ybaK is a non-essential gene; YbaK is a low abundance protein. otherPDB (H. influenzae): 1DBU, 1DBX.[4]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.