xapR:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''xapR'' | ''xapR'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK2399, b2405, JW2396, pndR, yfeB, pRndR''<ref name='LIB:Riley_2006'/> | ''ECK2399, b2405, JW2396, pndR, yfeB, pRndR''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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XapR transcriptional activator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | XapR transcriptional activator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Regulatory gene for xapAB<ref name='LIB:EcoGene'/> | Regulatory gene for xapAB<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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DNA-binding transcriptional activator<ref name='LIB:Riley_2006'/>, B2405<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YfeB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PndR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, XapR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | DNA-binding transcriptional activator<ref name='LIB:Riley_2006'/>, B2405<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YfeB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PndR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, XapR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI]) | |||
* GO:0016563 transcription activator activity ([http://www.geneontology.org/GO.evidence.shtml IEP]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:xapR|xapR]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:xapR|xapR]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=xapR&loc=MG1655:2520499..2519615,W3110:2527923..2527039,DH10B:2612264..2611380 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2612264&end=2611380&gene=xapR&aa=mervyrtdlkllryflavaeelhfgraaarlnmsqpplsihikelenqlgtqlfirhsrsvvlthagkilmeesrrllvnannvlarieqigrgeagrielgvvgtamwgrmrpvmrrflrenpnvdvlfrekmpamqmallerreldagiwrmatepptgftslrlhesaflvampeehhlssfstvplealrdeyfvtmppvytdwdflqrvcqqvgfspvvirevnepqtvlamvsmgigitliadsyaqmnwpgvifrplkqripadlyivyetqqvtpamvkllaaltq Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=xapR+AND+escherichia+coli Pubmed(xapR)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=xapR Textpresso(xapR)] | |||
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Revision as of 23:24, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
xapR |
|---|---|
| Gene Synonym(s) |
ECK2399, b2405, JW2396, pndR, yfeB, pRndR[1] |
| Product Desc. |
XapR transcriptional activator[2][3] Regulatory gene for xapAB[4] |
| Product Synonyms(s) |
DNA-binding transcriptional activator[1], B2405[2][1], YfeB[2][1], PndR[2][1], XapR[2][1] |
| Function from GO |
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
LysR family.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.