xapA:Quickview: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older editNewer edit →
Update TableEdit tables.
update QV table
Line 27: Line 27:


|-
|-
!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
||
||
''xapA''  
''xapA''  
|-
|-
!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
||
||
''ECK2401, b2407, JW2398, pndA''<ref name='LIB:Riley_2006'/>
''ECK2401, b2407, JW2398, pndA''<ref name='LIB:Riley_2006'/>
|-
|-
!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
||
||
XapA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
XapA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
Line 42: Line 42:


|-
|-
!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
||
||
purine nucleoside phosphorylase  II<ref name='LIB:Riley_2006'/>, B2407<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PndA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, XapA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
purine nucleoside phosphorylase  II<ref name='LIB:Riley_2006'/>, B2407<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PndA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, XapA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
|-
|-
!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
||
||
'''Cellular Component'''
* GO:0005737 cytoplasm ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Biological Process'''
* GO:0015949 nucleobase, nucleoside and nucleotide interconversion ([http://www.geneontology.org/GO.evidence.shtml IMP])
* GO:0055086 nucleobase, nucleoside and nucleotide metabolic process ([http://www.geneontology.org/GO.evidence.shtml IMP])
'''Molecular Function'''
* GO:0004731 purine-nucleoside phosphorylase activity ([http://www.geneontology.org/GO.evidence.shtml IDA])


|-
|-
!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
||
 
|-
!align=left {{table_heading_style}} |Regulation/Expression
||
||
transcription unit(s): [[:Category:Txn_unit:xapAB|xapAB]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:xapAB|xapAB]]<ref name='LIB:EcoCyc10.6'/>  
|-
|-
!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
||
||


|-
!align=left {{table_heading_style}} |Quick Links
||
[http://ecoliwiki.net/tools/display_dna.php?gene=xapA&loc=MG1655:2522900..2522067,W3110:2530324..2529491,DH10B:2614665..2613832 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2614665&end=2613832&gene=xapA&aa=msqvqfshnplfcidiiktykpdftprvafilgsglgaladqienavaisyeklpgfpvstvhghagelvlghlqgvpvvcmkgrghfyegrgmtimtdairtfkllgcellfctnaagslrpevgagslvalkdhintmpgtpmvglnddrfgerffslanaydaeyrallqkvakeegfpltegvfvsypgpnfetaaeirmmqiiggdvvgmsvvpevisarhcdlkvvavsaitnmaeglsdvklshaqtlaaaelskqnfinlicgflrkia Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=xapA+AND+escherichia+coli Pubmed(xapA)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=xapA Textpresso(xapA)]


|- class="tableEdit_footer"  
|- class="tableEdit_footer"  

Revision as of 23:24, 21 January 2010

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

xapA

Gene Synonym(s)

ECK2401, b2407, JW2398, pndA[1]

Product Desc.

XapA[2][3];

Component of xanthosine phosphorylase[2][3]

Product Synonyms(s)

purine nucleoside phosphorylase II[1], B2407[2][1], PndA[2][1], XapA[2][1]

Function from GO

Cellular Component

Biological Process

  • GO:0015949 nucleobase, nucleoside and nucleotide interconversion (IMP)
  • GO:0055086 nucleobase, nucleoside and nucleotide metabolic process (IMP)

Molecular Function

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): xapAB[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(xapA)    Textpresso(xapA)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=xapA:Quickview&oldid=1030355"