ubiF:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''ubiF'' | ''ubiF'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK0654, b0662, JW0659, yleB, G211''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ''ECK0654, b0662, JW0659, yleB, G211''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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OCTAPRENYL-METHYL-METHOXY-BENZOQ-OH-MON<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | OCTAPRENYL-METHYL-METHOXY-BENZOQ-OH-MON<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; produces 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol; required for ubiquinone synthesis; mutation confers resistance to bleomycin, phleomycin and heat<ref name='LIB:EcoGene'/> | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; produces 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol; required for ubiquinone synthesis; mutation confers resistance to bleomycin, phleomycin and heat<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol oxygenase<ref name='LIB:Riley_2006'/>, B0662<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YleB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, UbiF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol oxygenase<ref name='LIB:Riley_2006'/>, B0662<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YleB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, UbiF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI]) | |||
* GO:0008682 2-octoprenyl-3-methyl-6-methoxy-1,4-benzoquinone hydroxylase activity ([http://www.geneontology.org/GO.evidence.shtml IMP]) | |||
* GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen ([http://www.geneontology.org/GO.evidence.shtml ISS]) | |||
'''Biological Process''' | |||
* GO:0006744 ubiquinone biosynthetic process ([http://www.geneontology.org/GO.evidence.shtml IMP]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:ubiF|ubiF]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:ubiF|ubiF]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=ubiF&loc=MG1655:694324..695499,W3110:695523..696698,DH10B:746916..748091,REL606:677196..678371 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=677196&end=678371&gene=ubiF&aa=mtnqpteiaivgggmvggalalglaqhgfavtviehaepapfvadsqpdvrisaisaasvsllkglgvwdavqamrchpyrrletwewetahvvfdaaelklpllgymventvlqqalwqaleahpkvtlrvpgslialhrhddlqelelkggeviraklvigadgansqvrqmagigvhawqyaqscmlisvqcendpgdstwqqftpdgpraflplfdnwaslvwydsparirqlqnmnmaqlqaeiakhfpsrlgyvtplaagafpltrrhalqyvqpglalvgdaahtihplagqgvnlgyrdvdalidvlvnarsygeawasypvlkryqmrrmadnfimqsgmdlfyagfsnnlpplrfmrnlglmaaeragvlkrqalkyalgl Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ubiF+AND+escherichia+coli Pubmed(ubiF)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=ubiF Textpresso(ubiF)] | |||
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Revision as of 23:26, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
ubiF |
|---|---|
| Gene Synonym(s) | |
| Product Desc. |
OCTAPRENYL-METHYL-METHOXY-BENZOQ-OH-MON[2][3] 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; produces 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol; required for ubiquinone synthesis; mutation confers resistance to bleomycin, phleomycin and heat[4] |
| Product Synonyms(s) |
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol oxygenase[1], B0662[2][1], YleB[2][1], UbiF[2][1] |
| Function from GO |
Molecular Function
Biological Process
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
visC, ubiH, ubiF and mhpA are paralogs.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.