sxy:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''sxy'' | ''sxy'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''yccR, ECK0950, b0959, JW0942''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/> | ''yccR, ECK0950, b0959, JW0942''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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conserved protein<ref name='LIB:EcoCyc10.6'/>; transcriptional coactivator for CRP<ref name='LIB:EcoCyc11.1'/> | conserved protein<ref name='LIB:EcoCyc10.6'/>; transcriptional coactivator for CRP<ref name='LIB:EcoCyc11.1'/> | ||
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Required for expression of CRP-S-dependent promoters; characterized in H. influenzae as a gene required for competence<ref name='LIB:EcoGene'/> | Required for expression of CRP-S-dependent promoters; characterized in H. influenzae as a gene required for competence<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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conserved protein<ref name='LIB:Riley_2006'/>, B0959<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YccR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Sxy<ref name='LIB:EcoCyc11.1'/><ref name='LIB:Riley_2006'/> | conserved protein<ref name='LIB:Riley_2006'/>, B0959<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YccR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Sxy<ref name='LIB:EcoCyc11.1'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0016563 transcription activator activity ([http://www.geneontology.org/GO.evidence.shtml IMP]) | |||
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:yccR|yccR]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:yccR|yccR]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=sxy&loc=MG1655:1020361..1020990,W3110:1021560..1022189,DH10B:1074289..1074918,REL606:1038229..1038858 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1038229&end=1038858&gene=sxy&aa=mkslsykriyksqeylatlgtieyrslfgsysltvddtvfamvsdgelylraceqsaqycvkhppvwltykkcgrsvtlnyyrvdeslwrnqlklvrlskysldaalkekstrntrerlkdlpnmsfhleailgevgikdvralrilgakmcwlrlrqqnslvtekilfmlegaiigiheaalpvarrqelaewadsltpkqefpaele Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=sxy+AND+escherichia+coli Pubmed(sxy)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=sxy Textpresso(sxy)] | |||
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Revision as of 23:29, 21 January 2010
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
sxy |
|---|---|
| Gene Synonym(s) | |
| Product Desc. |
conserved protein[3]; transcriptional coactivator for CRP[2] Required for expression of CRP-S-dependent promoters; characterized in H. influenzae as a gene required for competence[4] |
| Product Synonyms(s) | |
| Function from GO |
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
CRP-S are specialized CRP-dependent promoters that also require the Sxy gene product for expression (Cameron, 2006).[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 3.2 3.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.