skp:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''skp'' | ''skp'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''hlpA, ECK0177, b0178, JW0173, firA, ompH''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/> | ''hlpA, ECK0177, b0178, JW0173, firA, ompH''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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periplasmic chaperone<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | periplasmic chaperone<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Periplasmic molecular chaperone for outer membrane proteins; trimeric<ref name='LIB:EcoGene'/> | Periplasmic molecular chaperone for outer membrane proteins; trimeric<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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periplasmic chaperone<ref name='LIB:Riley_2006'/>, B0178<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Skp<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, OmpH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HlpA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HLP-I<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | periplasmic chaperone<ref name='LIB:Riley_2006'/>, B0178<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Skp<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, OmpH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HlpA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HLP-I<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
'''Biological Process''' | |||
* GO:0006457 protein folding ([http://www.geneontology.org/GO.evidence.shtml IMP]) | |||
'''Cellular Component''' | |||
* GO:0030288 outer membrane-bounded periplasmic space ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:yaeT-hlpA-lpxD-fabZ-lpxAB-rnhB-dnaE|yaeT-hlpA-lpxD-fabZ-lpxAB-rnhB-dnaE]]<ref name='LIB:EcoCyc10.6'/>, ecfK-skp-lpxD-fabZ-lpxAB-rnhB-dnaE, [[:Category:Txn_unit:hlpA-lpxD-fabZ-lpxA|hlpA-lpxD-fabZ-lpxA]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:yaeT-hlpA-lpxD-fabZ-lpxAB-rnhB-dnaE|yaeT-hlpA-lpxD-fabZ-lpxAB-rnhB-dnaE]]<ref name='LIB:EcoCyc10.6'/>, ecfK-skp-lpxD-fabZ-lpxAB-rnhB-dnaE, [[:Category:Txn_unit:hlpA-lpxD-fabZ-lpxA|hlpA-lpxD-fabZ-lpxA]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=skp&loc=MG1655:200482..200967,W3110:200482..200967,DH10B:174586..175071 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=174586&end=175071&gene=skp&aa=mkkwllaaglglalatsaqaadkiaivnmgslfqqvaqktgvsntlenefkgraselqrmetdlqakmkklqsmkagsdrtklekdvmaqrqtfaqkaqafeqdrarrsneergklvtriqtavksvansqdidlvvdanavaynssdvkditadvlkqvk Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=skp+AND+escherichia+coli Pubmed(skp)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=skp Textpresso(skp)] | |||
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Revision as of 23:31, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
skp |
|---|---|
| Gene Synonym(s) | |
| Product Desc. |
Periplasmic molecular chaperone for outer membrane proteins; trimeric[4] |
| Product Synonyms(s) |
periplasmic chaperone[1], B0178[3][1], Skp[3][1], OmpH[3][1], HlpA[3][1], HLP-I[3][1] |
| Function from GO |
Molecular Function
Biological Process
Cellular Component
|
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): yaeT-hlpA-lpxD-fabZ-lpxAB-rnhB-dnaE[3], ecfK-skp-lpxD-fabZ-lpxAB-rnhB-dnaE, hlpA-lpxD-fabZ-lpxA[3] |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
The reported binding to DNA was an artifact due to the cationic nature of Skp.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 3.2 3.3 3.4 3.5 3.6 3.7 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.