secF:Expression: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older editNewer edit →
Update TableEdit tables.
Fixing GBrowse image on Expression pages.
Line 37: Line 37:
****************************************************************************************** -->{{Help Cellular levels}}
****************************************************************************************** -->{{Help Cellular levels}}
{|  id="C49c037d0a510e"  class=" tableEdit MoleculesPerCellTable"   
{|  id="C49c037d0a510e"  class=" tableEdit MoleculesPerCellTable"   
|-
|- align='left' bgcolor='#CCCCFF'
!|Molecule!!Organism or Strain!!Cellular level!!Units!!Medium!!Temperature °C!!Other (e.g. anaerobic)!!Growth rate!!Assay used!!Notes!!Reference(s)
!|Molecule!!Organism or Strain!!Cellular level!!Units!!Medium!!Temperature °C!!Other (e.g. anaerobic)!!Growth rate!!Assay used!!Notes!!Reference(s)


Line 60: Line 60:
****************************************************************************************** -->{{expression_transcription_help}}
****************************************************************************************** -->{{expression_transcription_help}}
{|  id="G46ab3d3ea5456"  class=" tableEdit Expression_operons_table"   
{|  id="G46ab3d3ea5456"  class=" tableEdit Expression_operons_table"   
|-
|- {{table heading style}}
!|Transcription unit(s)
!|Transcription unit(s)
|-  
|-  
Line 78: Line 78:
==Translation and Regulation of Translation==
==Translation and Regulation of Translation==
{{BacktoTop}}
{{BacktoTop}}
<protect>{{GBrowseFigureByCoord|428709|428749|ecoli|MG1655|Gene+DNA_+Protein|400|{{Nterm_closeup}} }}
<protect>{{GBrowseNtermFigure|428709|428749|ecoli|MG1655|Gene+DNA_+Protein|400|{{Nterm_closeup}} }}
<!--Translation_notes--></protect>
<!--Translation_notes--></protect>
===Notes===
===Notes===
Line 101: Line 101:
****************************************************************************************** -->{{Expression_allele_table_help}}
****************************************************************************************** -->{{Expression_allele_table_help}}
{|  id="W46ab3d3f767c3"  class=" tableEdit Expression_allele_table"   
{|  id="W46ab3d3f767c3"  class=" tableEdit Expression_allele_table"   
|-
|- {{table_heading_style}}
!|Allele Name!!Mutation!!Phenotype!!Reference
!|Allele Name!!Mutation!!Phenotype!!Reference


Line 119: Line 119:
****************************************************************************************** -->{{Expression_studies_table_help}}
****************************************************************************************** -->{{Expression_studies_table_help}}
{|  id="G46ab3d3fde454"  class=" tableEdit Expression_studies_table"   
{|  id="G46ab3d3fde454"  class=" tableEdit Expression_studies_table"   
|-
|- {{table heading style}}
!|Type!!Reference!!Notes
!|Type!!Reference!!Notes
|-  
|-  
Line 151: Line 151:
****************************************************************************************** -->{{Expression_resource_table_help}}
****************************************************************************************** -->{{Expression_resource_table_help}}
{|  id="U46ab3d4050564"  class=" tableEdit Expression_resource_table"   
{|  id="U46ab3d4050564"  class=" tableEdit Expression_resource_table"   
|-
|- {{table heading style}}
!|Resource Name!!Resource Type!!Description!!Source!!Notes
!|Resource Name!!Resource Type!!Description!!Source!!Notes


Line 173: Line 173:
****************************************************************************************** -->{{Gene_accessions_help}}
****************************************************************************************** -->{{Gene_accessions_help}}
{|  id="V46ab3d40b9f71"  class=" tableEdit Gene_accessions_table"   
{|  id="V46ab3d40b9f71"  class=" tableEdit Gene_accessions_table"   
|-
|- {{table_heading_style}}
!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
|-  
|-  
Line 223: Line 223:
****************************************************************************************** -->
****************************************************************************************** -->
{|  id="Q46a7a98b5c5c9"  class=" tableEdit Links_table"   
{|  id="Q46a7a98b5c5c9"  class=" tableEdit Links_table"   
|-
|- {{table_heading_style}}
!|Name!!URL!!Comments
!|Name!!URL!!Comments


Revision as of 22:04, 11 February 2010

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Overview Transcription Translation Turnover Experimental Links References Suggestions

Overview

This is a placeholder for a summary statement on how expression of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.


Cellular Levels

[back to top]


See Help:Cellular levels

Molecule Organism or Strain Cellular level Units Medium Temperature °C Other (e.g. anaerobic) Growth rate Assay used Notes Reference(s)
edit table

Notes

Transcription and Transcriptional Regulation

[back to top]


See Help:Expression_transcription for help entering or editing information in this section of EcoliWiki.

Transcription unit(s)

yajC-secDF

edit table
Figure courtesy of RegulonDB


Notes

This is a placeholder for a summary statement about how transcription of this gene is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Translation and Regulation of Translation

[back to top]


gbrowse_img.php?coord=428709..428749&genome=ecoli&name=MG1655&trackset=Gene+DNA_+Protein&width=400&figure=Nterm&.png
This picture shows the sequence around the N-terminus.

Notes

This is a placeholder for a summary statement about how translation of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Turnover and Regulation of Turnover

</protect>

Notes

This is a placeholder for a summary statement about turnover of this gene product. You can help EcoliWiki by becoming a user and writing/editing this statement.

Experimental

[back to top]


Mutations Affecting Expression See Help:Expression_mutations for help entering or editing information in this section of EcoliWiki.

Allele Name Mutation Phenotype Reference
edit table


Expression Studies See Help:Expression_studies for help entering or editing information in this section of EcoliWiki.

Type Reference Notes

microarray

GEO Profiles:b0409 (EcoliWiki Page)

NCBI GEO profiles for secF

microarray

GenExpDB:b0409 (EcoliWiki Page)

Summary of data for secF from multiple microarray studies

edit table


Expression Resources See Help:Expression_resources for help entering or editing information in this section of EcoliWiki.

Resource Name Resource Type Description Source Notes
edit table

<protect>

Notes

Accessions Related to secF Expression

[back to top]


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:EG10940

EchoBASE (EcoliWiki Page)

EchoBASE:EB0933

EcoliGenExpDB (EcoliWiki Page)

EcoliGenExpDB:b0409

EcoGene (EcoliWiki Page)

EcoGene:EG10940


edit table


Notes

Links

[back to top]



References

[back to top]


See Help:References for how to manage references in EcoliWiki.


Categories

[back to top]


Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=secF:Expression&oldid=1043830"