rpe:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''rpe'' | ''rpe'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK3373, b3386, JW3349, yhfD, dod, G7975''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ''ECK3373, b3386, JW3349, yhfD, dod, G7975''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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RIBULP3EPIM<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | RIBULP3EPIM<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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D-ribulose-5-phosphate 3-epimerase<ref name='LIB:EcoGene'/> | D-ribulose-5-phosphate 3-epimerase<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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D-ribulose-5-phosphate 3-epimerase<ref name='LIB:Riley_2006'/>, B3386<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Dod<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhfD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Rpe<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | D-ribulose-5-phosphate 3-epimerase<ref name='LIB:Riley_2006'/>, B3386<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Dod<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhfD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Rpe<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0004750 ribulose-phosphate 3-epimerase activity ([http://www.geneontology.org/GO.evidence.shtml IMP]) | |||
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:rpe-gph-trpS|rpe-gph-trpS]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:dam-rpe-gph-trpS|dam-rpe-gph-trpS]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:damX-dam-rpe-gph-trpS|damX-dam-rpe-gph-trpS]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:aroKB-damX-dam-rpe-gph-trpS|aroKB-damX-dam-rpe-gph-trpS]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:rpe-gph-trpS|rpe-gph-trpS]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:dam-rpe-gph-trpS|dam-rpe-gph-trpS]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:damX-dam-rpe-gph-trpS|damX-dam-rpe-gph-trpS]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:aroKB-damX-dam-rpe-gph-trpS|aroKB-damX-dam-rpe-gph-trpS]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=rpe&loc=MG1655:3513081..3512404,W3110:4125357..4126034,REL606:3443741..3443064,DH10B:3610826..3610149 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3610826&end=3610149&gene=rpe&aa=mkqyliapsilsadfarlgedtakalaagadvvhfdvmdnhyvpnltigpmvlkslrnygitapidvhlmvkpvdrivpdfaaagasiitfhpeasehvdrtlqlikengckaglvfnpatplsyldyvmdkldvillmsvnpgfggqsfipqtldklrevrrridesgfdirlevdggvkvnnigeiaaagadmfvagsaifdqpdykkvidemrselakvshe Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rpe+AND+escherichia+coli Pubmed(rpe)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=rpe Textpresso(rpe)] | |||
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Revision as of 23:10, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
rpe |
|---|---|
| Gene Synonym(s) | |
| Product Desc. |
D-ribulose-5-phosphate 3-epimerase[4] |
| Product Synonyms(s) |
D-ribulose-5-phosphate 3-epimerase[1], B3386[2][1], Dod[2][1], YhfD[2][1], Rpe[2][1] |
| Function from GO |
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): rpe-gph-trpS[2], dam-rpe-gph-trpS[2], damX-dam-rpe-gph-trpS[2], aroKB-damX-dam-rpe-gph-trpS[2] |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.