purF:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''purF''  
''purF''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK2306, b2312, JW2309, adeub, ade(ub)''<ref name='LIB:Riley_2006'/>
''ECK2306, b2312, JW2309, adeub, ade(ub)''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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PurF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
PurF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
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Amidophosphoribosyltransferase, purine synthesis; GPATase<ref name='LIB:EcoGene'/>
Amidophosphoribosyltransferase, purine synthesis; GPATase<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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amidophosphoribosyltransferase<ref name='LIB:Riley_2006'/>, B2312<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PurF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
amidophosphoribosyltransferase<ref name='LIB:Riley_2006'/>, B2312<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PurF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Cellular Component'''
* GO:0005829 cytosol ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0005737 cytoplasm ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Molecular Function'''
* GO:0004044 amidophosphoribosyltransferase activity ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0016757 transferase activity, transferring glycosyl groups ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Biological Process'''
* GO:0006164 purine nucleotide biosynthetic process ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0006541 glutamine metabolic process ([http://www.geneontology.org/GO.evidence.shtml IDA])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:cvpA-purF-ubiX|cvpA-purF-ubiX]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:cvpA-purF-ubiX|cvpA-purF-ubiX]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=purF&loc=MG1655:2428260..2426743,W3110:2435684..2434167,DH10B:2520025..2518508,REL606:2373830..2372313 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2373830&end=2372313&gene=purF&aa=mcgivgiagvmpvnqsiydaltvlqhrgqdaagiitidanncfrlrkanglvsdvfearhmqrlqgnmgighvryptagsssaseaqpfyvnspygitlahngnltnahelrkklfeekrrhinttsdseillnifaseldnfrhypleadnifaaiaatnrlirgayacvamiighgmvafrdpngirplvlgkrdidenrteymvasesvaldtlgfdflrdvapgeaiyiteegqlftrqcadnpvsnpclfeyvyfarpdsfidkisvysarvnmgtklgekiarewedldidvvipipetscdialeiarilgkpyrqgfvknryvgrtfimpgqqlrrksvrrklnanraefrdknvllvddsivrgttseqiiemareagakkvylasaapeirfpnvygidmpsateliahgrevdeirqiigadglifqdlndlidavraenpdiqqfecsvfngvyvtkdvdqgyldfldtlrnddakavqrqnevenlemhneg Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=purF+AND+escherichia+coli Pubmed(purF)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=purF Textpresso(purF)]


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Revision as of 00:21, 22 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

purF

Gene Synonym(s)

ECK2306, b2312, JW2309, adeub, ade(ub)[1]

Product Desc.

PurF[2][3];

Component of amidophosphoribosyl transferase[2][3]

Amidophosphoribosyltransferase, purine synthesis; GPATase[4]

Product Synonyms(s)

amidophosphoribosyltransferase[1], B2312[2][1], PurF[2][1]

Function from GO

Cellular Component

Molecular Function

Biological Process

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): cvpA-purF-ubiX[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(purF)    Textpresso(purF)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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