rffA:Quickview: Difference between revisions

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{{Tab On|Quickview|rffA}}{{Tab|Gene|rffA}}{{Tab|Gene Product(s)|rffA}}{{Tab|Expression|rffA}}{{Tab|Evolution|rffA}}{{Tab|On One Page|rffA}}{{TabsBottom}}
{{Tab On|Quickview|rffA}}{{Tab|Gene|rffA}}{{Tab|Gene Product(s)|rffA}}{{Tab|Expression|rffA}}{{Tab|Evolution|rffA}}{{Tab|On One Page|rffA}}{{TabsBottom}}
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[rffA:Gene|''rffA]]'' (synonyms: ''ECK3783, b3791, JW3765, wecE, yifI, rff, fcnA'')<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''rffA''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[rffA:Gene_Product(s)|RffA product]]<ref name='LIB:Riley_2006'/>: TDP-4-oxo-6-deoxy-D-glucose transaminase product, B3791 product, Rff product, YifI product, FcnA product, WecE product
''ECK3783, b3791, JW3765, wecE, yifI, rff, fcnA''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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RFFTRANS-MONOMER<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Lipid III biosynthesis; needed for ECA synthesis<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''TDP-4-oxo-6-deoxy-D-glucose transaminase<ref name='LIB:Riley_2006'/>, B3791<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Rff<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YifI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RffA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, FcnA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, WecE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3783, JW3765, rff, wecE, yifI, b3791''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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|-
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:rfe|rfe]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:rfe|rfe]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=rffA&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11456]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001419&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=rffA&loc=MG1655%3A3973169..3974299,W3110%3A3661535..3660405,DH10B%3A4072089..4073219,BW2952%3A3862838..3863968]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3862838&end=3863968&gene=rffA&aa=mipfnappvvgteldymqsamgsgklcgdggftrrcqqwleqrfgsakvlltpsctaslemaallldiqpgdevimpsytfvstanafvlrgakivfvdvrpdtmnidetlieaaitdktrvivpvhyagvacemdtimalakkhnlfvvedaaqgvmstykgralgtighigcfsfhetknytaggeggatlindkalieraeiirekgtnrsqffrgqvdkytwrdigssylmsdlqaaylwaqleaadrinqqrlalwqnyydalaplakagrielpsipdgcvqnahmfyiklrdiddrsalinflkeaeimavfhyiplhgcpagehfgefhgedryttkeserllrlplfynlspvnqrtviatllnyfs]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rffA+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=rffA]]&nbsp;&nbsp;
 
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==Notes==
===Notes===
{{BacktoTop}}
 
 
 




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==References==
==References==
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Latest revision as of 21:55, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

rffA

Gene Synonym(s)

ECK3783, b3791, JW3765, wecE, yifI, rff, fcnA[1][2]

Product Desc.

Lipid III biosynthesis; needed for ECA synthesis[3]

Product Synonyms(s)

TDP-4-oxo-6-deoxy-D-glucose transaminase[1], B3791[2][1], Rff[2][1], YifI[2][1], RffA[2][1], FcnA[2][1], WecE[2][1] , ECK3783, JW3765, rff, wecE, yifI, b3791

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): rfe[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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