mngR:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''mngR''  
''mngR''
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK0718, b0730, JW0719, farR, ybgB, G30''<ref name='LIB:Riley_2006'/>
''ECK0718, b0730, JW0719, farR, ybgB, G30''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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MngR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
MngR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
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mngAB operon repressor, mannosyl glycerate utilization<ref name='LIB:EcoGene'/>
mngAB operon repressor, mannosyl glycerate utilization<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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DNA-binding transcriptional dual regulator, fatty-acyl-binding<ref name='LIB:Riley_2006'/>, B0730<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbgB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, transcriptional regulator of succinylCoA synthetase operon<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, fatty acyl responsive regulator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, P30<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, FarR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''DNA-binding transcriptional dual regulator, fatty-acyl-binding<ref name='LIB:Riley_2006'/>, B0730<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbgB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, transcriptional regulator of succinylCoA synthetase operon<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, fatty acyl responsive regulator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, P30<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, FarR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0718, farR, JW0719, ybgB, b0730''
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:mngR|mngR]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:mngR|mngR]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=mngR&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11109]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001095&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=mngR&loc=MG1655%3A765098..764376,W3110%3A766297..765575,DH10B%3A817690..816968,REL606%3A746035..746757,BW2952%3A667136..667858]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=667136&end=667858&gene=mngR&aa=mghkplyrqiadrireqiargelkpgdalptesalqtefgvsrvtvrqalrqlveqqilesiqgsgtyvkeervnydifqltsfdeklsdrhvdthsevlifevipaddflqqqlqitpqdrvwhvkrvryrkqkpmaleetwmplalfpdltwqvmenskyhfieevkkmvidrseqeiiplmpteemsrllnisqtkpilekvsrgylvdgrvfeysrnafntddykftliaqrkssr]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=mngR+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=mngR]]&nbsp;&nbsp;


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Latest revision as of 21:48, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

mngR

Gene Synonym(s)

ECK0718, b0730, JW0719, farR, ybgB, G30[1]

Product Desc.

MngR[2][3];

Component of MngR transcriptional repressor[2][3]; MngR-acyl-CoA[2][3]

mngAB operon repressor, mannosyl glycerate utilization[4]

Product Synonyms(s)

DNA-binding transcriptional dual regulator, fatty-acyl-binding[1], B0730[2][1], YbgB[2][1], transcriptional regulator of succinylCoA synthetase operon[2][1], fatty acyl responsive regulator[2][1], P30[2][1], FarR[2][1] , ECK0718, farR, JW0719, ybgB, b0730

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): mngR[2]

Regulation/Activity
Quick Links



        

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Notes

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Originally identifed as a fatty acyl-responsive regulator FarR based on in vitro experiments; this conclusion is now in doubt based on microarray experiments.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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