gpsA:Evolution: Difference between revisions

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!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF01210 PFAM:PF01210]
[http://pfam.janelia.org/family/PF01210 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=48179 SUPERFAMILY:48179]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=51735 SUPERFAMILY:51735]
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[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
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[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11728:SF0 PTHR11728:SF0]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF07479 PF07479  NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus]
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[[EcoCyc]]
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EcoCyc:EG20091
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG20091
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120002442
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB4142
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0011795
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:36, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000002204 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000017679 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT2G40690 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000021683 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000023610 (score: 0.684)
  • ENSBTAP00000012955 (score: 0.321)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00038184 (score: 1.000; bootstrap: 100%)
  • WBGene00031452 (score: 0.436)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00009824 (score: 1.000; bootstrap: 100%)
  • WBGene00010778 (score: 0.444)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000012187 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000008053 (score: 0.576)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000014267 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-040426-2576 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-3523 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-1262 (score: 0.721)
  • ZDB-CDNA-040425-1263 (score: 0.721)
  • ZDB-GENE-030131-3906 (score: 0.721)
  • ZDB-CDNA-050417-210 (score: 0.693)
  • ZDB-GENE-050417-209 (score: 0.693)
  • ZDB-CDNA-041010-220 (score: 0.676)
  • ZDB-GENE-041010-220 (score: 0.676)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0001128 (score: 1.000; bootstrap: 100%)
  • FBgn0034825 (score: 0.480)
  • FBgn0051169 (score: 0.377)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA16715-PA (score: 1.000; bootstrap: 100%)
  • GA16060-PA (score: 0.273)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000019678 (score: 1.000; bootstrap: 100%)
  • ENSGALP00000018695 (score: 0.745)
  • ENSGALP00000028211 (score: 0.381)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000301149 (score: 1.000; bootstrap: 100%)
  • ENSP00000282541 (score: 0.698)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000008603 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000025883 (score: 0.703)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000022926 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000018971 (score: 0.111)

From Inparanoid:20070104

Mus musculus

  • MGI:95679 (score: 1.000; bootstrap: 100%)
  • MGI:1289257 (score: 0.699)
  • MGI:1919502 (score: 0.607)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000008412 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000025382 (score: 0.293)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000026200 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000036106 (score: 0.715)
  • ENSRNOP00000033802 (score: 0.610)
  • ENSRNOP00000006506 (score: 0.494)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YOL059W (score: 1.000; bootstrap: 100%)
  • YDL022W (score: 0.614)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPBC2155 (score: 1.000; bootstrap: 100%)
  • SPAC23D34c (score: 0.514)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000134996 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000173703 (score: 0.786)
  • NEWSINFRUP00000154494 (score: 0.649)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00020090001 (score: 1.000; bootstrap: 100%)
  • GSTENP00023665001 (score: 0.674)
  • GSTENP00033849001 (score: 0.486)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000039939 (score: 1.000; bootstrap: 90%)

From Inparanoid:20070104

Shigella flexneri

GPSA

From SHIGELLACYC

E. coli O157

GPSA

From ECOO157CYC

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus

Superfamily (EcoliWiki Page)

SUPERFAMILY:48179

Superfamily (EcoliWiki Page)

SUPERFAMILY:51735

Panther (EcoliWiki Page)

PTHR11728:SF0

Pfam (EcoliWiki Page)

PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus

EcoCyc

EcoCyc:EG20091

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG20091

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120002442

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB4142

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0011795

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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