dxr:Quickview: Difference between revisions
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{| | {| id="X49aee44939d14" class=" tableEdit New_Quickview_Table" | ||
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''dxr'' | ''dxr'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK0172, b0173, JW0168, ispC, yaeM''<ref name='LIB:Riley_2006'/> | ''ECK0172, b0173, JW0168, ispC, yaeM''<ref name='LIB:Riley_2006'/>, yaeM'' | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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Dxr<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | Dxr<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | ||
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1-deoxy-D-xylulose 5-phosphate (DXP) reductoisomerase, NAPDH-dependent; also called 2-C-methyl-D-erythritol 4-phosphate (MEP) synthase; alternative nonmevalonate (DXP) pathway for terpenoid biosynthesis; dimeric<ref name='LIB:EcoGene'/> | 1-deoxy-D-xylulose 5-phosphate (DXP) reductoisomerase, NAPDH-dependent; also called 2-C-methyl-D-erythritol 4-phosphate (MEP) synthase; alternative nonmevalonate (DXP) pathway for terpenoid biosynthesis; dimeric<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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1-deoxy-D-xylulose 5-phosphate reductoisomerase<ref name='LIB:Riley_2006'/>, B0173<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Dxr<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YaeM<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, IspC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ''1-deoxy-D-xylulose 5-phosphate reductoisomerase<ref name='LIB:Riley_2006'/>, B0173<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Dxr<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YaeM<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, IspC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0172, ispC, JW0168, yaeM, b0173'' | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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<GO_nr /> | |||
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!align=left {{table_heading_style}} |Knock-Out Phenotype | |||
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!align=left | !align=left {{table_heading_style}} |Regulation/Expression | ||
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transcription unit(s): [[:Category:Txn_unit:dxr|dxr]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:dxr|dxr]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=dxr&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG12715]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002371&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=dxr&loc=MG1655%3A193521..194717,W3110%3A193521..194717,DH10B%3A167625..168821,BW2952%3A193520..194716]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=193520&end=194716&gene=dxr&aa=mkqltilgstgsigcstldvvrhnpehfrvvalvagknvtrmveqclefspryavmddeasakllktmlqqqgsrtevlsgqqaacdmaaledvdqvmaaivgaagllptlaairagktillankeslvtcgrlfmdavkqskaqllpvdsehnaifqslpqpiqhnlgyadleqngvvsilltgsggpfretplrdlatmtpdqacrhpnwsmgrkisvdsatmmnkgleyiearwlfnasasqmevlihpqsvihsmvryqdgsvlaqlgepdmrtpiahtmawpnrvnsgvkpldfcklsaltfaapdydrypclklameafeqgqaattalnaaneitvaaflaqqirftdiaalnlsvlekmdmrepqcvddvlsvdanarevarkevmrlas]] [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=dxr+AND+escherichia+coli]] [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=dxr]] | |||
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Latest revision as of 21:51, 27 May 2013
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
| Standard Name |
dxr |
|---|---|
| Gene Synonym(s) |
ECK0172, b0173, JW0168, ispC, yaeM[1], yaeM |
| Product Desc. |
Component of DXP reductoisomerase[2]; 1-deoxy-D-xylulose 5-phosphate reductoisomerase[3] 1-deoxy-D-xylulose 5-phosphate (DXP) reductoisomerase, NAPDH-dependent; also called 2-C-methyl-D-erythritol 4-phosphate (MEP) synthase; alternative nonmevalonate (DXP) pathway for terpenoid biosynthesis; dimeric[4] |
| Product Synonyms(s) |
1-deoxy-D-xylulose 5-phosphate reductoisomerase[1], B0173[2][1], Dxr[2][1], YaeM[2][1], IspC[2][1] , ECK0172, ispC, JW0168, yaeM, b0173 |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links |
|
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.