ybcM:Quickview: Difference between revisions

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{{Tab On|Quickview|ybcM}}{{Tab|Gene|ybcM}}{{Tab|Gene Product(s)|ybcM}}{{Tab|Expression|ybcM}}{{Tab|Evolution|ybcM}}{{Tab|On One Page|ybcM}}{{TabsBottom}}
{{Tab On|Quickview|ybcM}}{{Tab|Gene|ybcM}}{{Tab|Gene Product(s)|ybcM}}{{Tab|Expression|ybcM}}{{Tab|Evolution|ybcM}}{{Tab|On One Page|ybcM}}{{TabsBottom}}
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[ybcM:Gene|''ybcM]]'' (synonyms: ''ECK0537, b0546, JW0534'')<ref name='LIB:Riley_2006'/>
''ybcM''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[ybcM:Gene_Product(s)|YbcM product]]<ref name='LIB:Riley_2006'/>: DLP12 prophage; predicted DNA-binding transcriptional regulator product, B0546 product
''ECK0537, b0546, JW0534''<ref name='LIB:Riley_2006'/>, JW0534''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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putative ARAC-type regulatory protein<ref name='LIB:EcoCyc10.6'/> DLP12 prophage; predicted DNA-binding transcriptional regulator<ref name='LIB:EcoCyc11.1'/>  
putative ARAC-type regulatory protein<ref name='LIB:EcoCyc10.6'/>; DLP12 prophage; predicted DNA-binding transcriptional regulator<ref name='LIB:EcoCyc11.1'/>


AraC family transcriptional activator, function unknown, DLP12 prophage<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''DLP12 prophage; predicted DNA-binding transcriptional regulator<ref name='LIB:Riley_2006'/>, B0546<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbcM<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0537, JW0534, b0546''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:ybcL|ybcL]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:ybcL|ybcL]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ybcM&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6302]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002910&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ybcM&loc=MG1655%3A570677..571474,W3110%3A570677..571474,DH10B%3A510009..510806,REL606%3A543344..544141,BW2952%3A473437..474234]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=473437&end=474234&gene=ybcM&aa=mlargktnlkieeirmhkhheihrvkplmpalcrirqgkkvinwethtltvdnnqiilfpcgyefyienypeaglylaemlylpidliesfqklytvtdqirnktsfflpqnpeliycweqlktsvsrgfstkiqehlamgvllslgvnhvnhlllsyskqslisrcynlllsepgtkwtankvarylyisvstlhrrlasegvsfqsilddvrlnnalsaiqttvkpiseiarengykcpsrfterfhnrfnitpreirkasre]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ybcM+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ybcM]]&nbsp;&nbsp;
 
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==Notes==
===Notes===
{{BacktoTop}}
 
 
 




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==References==
==References==
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<references/>
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Latest revision as of 21:44, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

ybcM

Gene Synonym(s)

ECK0537, b0546, JW0534[1], JW0534

Product Desc.

putative ARAC-type regulatory protein[2]; DLP12 prophage; predicted DNA-binding transcriptional regulator[3]

AraC family transcriptional activator, function unknown, DLP12 prophage[4]

Product Synonyms(s)

DLP12 prophage; predicted DNA-binding transcriptional regulator[1], B0546[2][1], YbcM[2][1] , ECK0537, JW0534, b0546

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ybcL[2]

Regulation/Activity
Quick Links



        

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Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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