atoA:Quickview: Difference between revisions

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{{Tab On|Quickview|atoA}}{{Tab|Gene|atoA}}{{Tab|Gene Product(s)|atoA}}{{Tab|Expression|atoA}}{{Tab|Evolution|atoA}}{{Tab|On One Page|atoA}}{{TabsBottom}}
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[atoA:Gene|''atoA]]'' (synonyms: ''ECK2215, b2222, JW2216'')<ref name='LIB:Riley_2006'/>
''atoA''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[atoA:Gene_Product(s)|AtoA product]]<ref name='LIB:Riley_2006'/>: acetyl-CoA:acetoacetyl-CoA transferase, beta subunit<ref name='LIB:Riley_2006'/>, B2222<ref name='LIB:EcoCyc10.6'/>, AtoA<ref name='LIB:EcoCyc10.6'/>, [[:Category:Complex:&beta; complex|&beta; complex]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Complex:acetoacetyl-CoA transferase|acetoacetyl-CoA transferase]]<ref name='LIB:EcoCyc10.6'/>
''ECK2215, b2222, JW2216''<ref name='LIB:Riley_2006'/>, JW2216''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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AtoA<ref name='LIB:EcoCyc10.6'/>acetyl-CoA:acetoacetyl-CoA transferase, &beta; subunit<ref name='LIB:EcoCyc11.1'/>
AtoA<ref name='LIB:EcoCyc10.6'/>; acetyl-CoA:acetoacetyl-CoA transferase, β subunit<ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:β complex|β complex]]<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; [[:Category:Complex:acetoacetyl-CoA transferase|acetoacetyl-CoA transferase]]<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/><ref name=PMID:3025185/>


Acetate CoA-transferase<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''acetyl-CoA:acetoacetyl-CoA transferase, beta subunit<ref name='LIB:Riley_2006'/>, B2222<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AtoA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2215, JW2216, b2222''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:txn_units:atoDAEB|atoDAEB]]<ref name='LIB:EcoCyc10.6'/>, OP00154, atoDAB  
transcription unit(s): [[:Category:Txn_unit:atoDAEB|atoDAEB]]<ref name='LIB:EcoCyc10.6'/>, OP00154, atoDAB  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=atoA&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11670]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001613&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=atoA&loc=MG1655%3A2322131..2322781,W3110%3A2328779..2329429,REL606%3A2270809..2271459,DH10B%3A2413119..2413769,BW2952%3A2207936..2208586]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2207936&end=2208586&gene=atoA&aa=mdakqriarrvaqelrdgdivnlgiglptmvanylpegihitlqsengflglgpvttahpdlvnaggqpcgvlpgaamfdsamsfalirgghidacvlgglqvdeeanlanwvvpgkmvpgmggamdlvtgsrkviiamehcakdgsakilrrctmpltaqhavhmlvtelavfrfidgkmwlteiadgcdlatvraktearfevaadlntqrgdl]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=atoA+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=atoA]]&nbsp;&nbsp;
 
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==Notes==
===Notes===
{{BacktoTop}}
 
 
 




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==References==
==References==
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Latest revision as of 21:52, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

atoA

Gene Synonym(s)

ECK2215, b2222, JW2216[1], JW2216

Product Desc.

AtoA[2]; acetyl-CoA:acetoacetyl-CoA transferase, β subunit[3];

Component of β complex[2][3]; acetoacetyl-CoA transferase[2][3][4]

Acetate CoA-transferase[5]

Product Synonyms(s)

acetyl-CoA:acetoacetyl-CoA transferase, beta subunit[1], B2222[2][1], AtoA[2][1] , ECK2215, JW2216, b2222

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): atoDAEB[2], OP00154, atoDAB

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ Jenkins, LS & Nunn, WD (1987) Genetic and molecular characterization of the genes involved in short-chain fatty acid degradation in Escherichia coli: the ato system. J. Bacteriol. 169 42-52 PubMed
  5. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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