fliA:Quickview: Difference between revisions

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{{Tab On|Quickview|fliA}}{{Tab|Gene|fliA}}{{Tab|Gene Product(s)|fliA}}{{Tab|Expression|fliA}}{{Tab|Evolution|fliA}}{{Tab|On One Page|fliA}}{{TabsBottom}}
{{Tab On|Quickview|fliA}}{{Tab|Gene|fliA}}{{Tab|Gene Product(s)|fliA}}{{Tab|Expression|fliA}}{{Tab|Evolution|fliA}}{{Tab|On One Page|fliA}}{{TabsBottom}}
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[fliA:Gene|''fliA]]'' (synonyms: ''ECK1921, b1922, JW1907, flaD, rpoF'')<ref name='LIB:Riley_2006'/>
''fliA''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[fliA:Gene_Product(s)|FliA product]]<ref name='LIB:Riley_2006'/>: RNA polymerase, sigma 28 (sigma F) factor<ref name='LIB:Riley_2006'/>, B1922<ref name='LIB:EcoCyc10.6'/>, RpoF<ref name='LIB:EcoCyc10.6'/>, FlaD<ref name='LIB:EcoCyc10.6'/>, FliA<ref name='LIB:EcoCyc10.6'/>, sigmaF factor<ref name='LIB:EcoCyc10.6'/>, sigma F factor<ref name='LIB:EcoCyc11.1'/>, sigma 28 factor<ref name='LIB:EcoCyc11.1'/>, [[:Category:Complex:RNA polymerase sigma 28|RNA polymerase sigma 28]]<ref name='LIB:EcoCyc11.1'/>
''ECK1921, b1922, JW1907, flaD, rpoF''<ref name='LIB:Riley_2006'/>, rpoF''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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sigma28 factor<ref name='LIB:EcoCyc10.6'/>RNA polymerase, sigma 28 (sigma F) factor<ref name='LIB:EcoCyc11.1'/>
sigma28 factor<ref name='LIB:EcoCyc10.6'/>; RNA polymerase, sigma 28 (sigma F) factor<ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:RNA polymerase sigma 28|RNA polymerase sigma 28]]<ref name='LIB:EcoCyc11.1'/>


Transcription factor sigma 28 for class III flagellar operons<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''RNA polymerase, sigma 28 (sigma F) factor<ref name='LIB:Riley_2006'/>, B1922<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RpoF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, FlaD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, FliA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, sigmaF factor<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, sigma F factor<ref name='LIB:EcoCyc11.1'/><ref name='LIB:Riley_2006'/>, sigma 28 factor<ref name='LIB:EcoCyc11.1'/><ref name='LIB:Riley_2006'/> , ECK1921, flaD, JW1907, rpoF, b1922''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:txn_units:fliAZY|fliAZY]]<ref name='LIB:EcoCyc10.6'/>, fliA  
transcription unit(s): [[:Category:Txn_unit:fliAZY|fliAZY]]<ref name='LIB:EcoCyc10.6'/>, fliA  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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|-
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=fliA&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11355]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001324&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=fliA&loc=MG1655%3A1999813..1999094,W3110%3A2003926..2003207,DH10B%3A2090821..2090102,BW2952%3A1891577..1892296]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1891577&end=1892296&gene=fliA&aa=mnslytaegvmdkhslwqryvplvrhealrlqvrlpasvelddllqaggigllnaverydalqgtafttyavqrirgamldelrsrdwvprsvrrnarevaqaigqleqelgrnatetevaerlgidiadyrqmlldtnnsqlfsydewreehgdsielvtddhqrenplqqlldsnlrqrvmeaietlpereklvltlyyqeelnlkeigavlevgesrvsqlhsqaikrlrtklgkl]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=fliA+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=fliA]]&nbsp;&nbsp;
 
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==Notes==
===Notes===
{{BacktoTop}}
 
 
 




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==References==
==References==
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Latest revision as of 21:50, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

fliA

Gene Synonym(s)

ECK1921, b1922, JW1907, flaD, rpoF[1], rpoF

Product Desc.

sigma28 factor[2]; RNA polymerase, sigma 28 (sigma F) factor[3];

Component of RNA polymerase sigma 28[3]

Transcription factor sigma 28 for class III flagellar operons[4]

Product Synonyms(s)

RNA polymerase, sigma 28 (sigma F) factor[1], B1922[2][1], RpoF[2][1], FlaD[2][1], FliA[2][1], sigmaF factor[2][1], sigma F factor[3][1], sigma 28 factor[3][1] , ECK1921, flaD, JW1907, rpoF, b1922

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): fliAZY[2], fliA

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.8 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 3.3 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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