tig:Evolution: Difference between revisions

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!|Organism!!Homologs (Statistics)!!Comments
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From ECOO157CYC  
From ECOO157CYC  


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!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF05697 PFAM:PF05697]
[http://pfam.janelia.org/family/PF00254 PF00254  FKBP-type peptidyl-prolyl cis-trans isomerase]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=54534 SUPERFAMILY:54534]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=102735 SUPERFAMILY:102735]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=109998 SUPERFAMILY:109998]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF05697 PF05697  Bacterial trigger factor protein (TF)]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF05698 PF05698  Bacterial trigger factor protein (TF) C-terminus]
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[[EcoCyc]]
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EcoCyc:EG11003
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG11003
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000992
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB0996
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0001511
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:30, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Arabidopsis thaliana

  • AT5G55220 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • Q5Z4M6 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000036071 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

TIG

From SHIGELLACYC

E. coli O157

TIG

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase

Superfamily (EcoliWiki Page)

SUPERFAMILY:54534

Superfamily (EcoliWiki Page)

SUPERFAMILY:102735

Superfamily (EcoliWiki Page)

SUPERFAMILY:109998

Pfam (EcoliWiki Page)

PF05697 Bacterial trigger factor protein (TF)

Pfam (EcoliWiki Page)

PF05698 Bacterial trigger factor protein (TF) C-terminus

EcoCyc

EcoCyc:EG11003

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG11003

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000992

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0996

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0001511

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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