Phage Mu orf2:Gene: Difference between revisions
Page created by batch script. |
touch |
||
| (15 intermediate revisions by the same user not shown) | |||
| Line 10: | Line 10: | ||
-->{{#css:Suppresslinks.css}}<css>{{:Suppresslinks.css}}</css> | -->{{#css:Suppresslinks.css}}<css>{{:Suppresslinks.css}}</css> | ||
{{TabsTop}} | {{TabsTop}} | ||
{{Tab|Quickview| | {{Tab|Quickview|Phage_Mu_orf2}}{{Tab On|Gene|Phage_Mu_orf2}}{{Tab|Gene Product(s)|Phage_Mu_orf2}}{{Tab|Expression|Phage_Mu_orf2}}{{Tab|Evolution|Phage_Mu_orf2}}{{Tab|On One Page|Phage_Mu_orf2}}{{TabsBottom}} | ||
{| | {| | ||
|- style="background-color:white; border:solid 2px #CCFFFF; text-align:center; white-space: nowrap;" | |- style="background-color:white; border:solid 2px #CCFFFF; text-align:center; white-space: nowrap;" | ||
|{{Sub}}[[#Nomenclature |Nomenclature]] | |{{Sub}}[[#Nomenclature |Nomenclature]] | ||
|{{Sub}}[[#Location(s) and DNA Sequence|Location(s) and DNA Sequence]] | |{{Sub}}[[#Location(s) and DNA Sequence|Location(s) and DNA Sequence]] | ||
|{{Sub}}[[#Sequence Features|Sequence Features]] | |||
|{{Sub}}[[#Alleles and Phenotypes |Alleles and Phenotypes]] | |{{Sub}}[[#Alleles and Phenotypes |Alleles and Phenotypes]] | ||
|{{Sub}}[[#Genetic Interactions | Genetic Interactions]] | |||
|{{Sub}}[[#Genetic Resources |Genetic Resources]] | |{{Sub}}[[#Genetic Resources |Genetic Resources]] | ||
|{{Sub}}[[#Accessions in Other Databases |Accessions]] | |{{Sub}}[[#Accessions in Other Databases |Accessions]] | ||
| Line 25: | Line 27: | ||
==Nomenclature== | ==Nomenclature== | ||
{{BacktoTop}} | {{BacktoTop}} | ||
{{{ | <protect><!--box uid=421aa90e079fa326b6494f812ad13e79.162470.C49edfca3cf6b9--> | ||
<!-- | |||
****************************************************************************************** | |||
* | |||
* ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. ** | |||
* | |||
****************************************************************************************** -->{{Gene_nomenclature_help}} | |||
{| id="C49edfca3cf6b9" class=" tableEdit Gene_nomenclature_table" | |||
|- | |||
!align=left {{table_heading_style}} |Standard name | |||
|| | |||
orf2 | |||
|- | |||
!align=left {{table_heading_style}} |Mnemonic | |||
|| | |||
|- | |||
!align=left {{table_heading_style}} |Synonyms | |||
|| | |||
Phage_Mu_orf2, Phage_Mu_23 | |||
|- class="tableEdit_footer" | |||
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162470.C49edfca3cf6b9&page=162470&pagename={{FULLPAGENAMEE}}&type=1&template=Gene_nomenclature_table edit table]</span> || | |||
|} | |||
<!--box uid=421aa90e079fa326b6494f812ad13e79.162470.C49edfca3cf6b9--></protect> | |||
</protect> | </protect> | ||
===Notes=== | ===Notes=== | ||
==Location(s) and DNA Sequence== | ==Location(s) and DNA Sequence== | ||
{{BacktoTop}} | {{BacktoTop}} | ||
<protect> | <protect> | ||
{{{ | <protect><!--box uid=421aa90e079fa326b6494f812ad13e79.162470.O49edfca3de243--> | ||
<!-- | |||
****************************************************************************************** | |||
* | |||
* ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. ** | |||
* | |||
****************************************************************************************** -->{{Gene_location_help}} | |||
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="O49edfca3de243" class=" tableEdit Gene_location_table" | |||
|- {{table_heading_style}} | |||
!|Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links | |||
|- | |||
| | |||
| | |||
| | |||
NC_000929: 10207..12137<br /><gbrowseImage> | |||
name=NC_000929:10207..12137 | |||
source=bacteriophage_Mu | |||
preset=GeneLocation | |||
</gbrowseImage> | |||
| | |||
{{GBrowseLink|bacteriophage_mu|NC_000929|10979|11365|GBrowse (Phage_Mu)}} | |||
| | |||
{{GBrowseFastaLink|bacteriophage_mu|NC_000929|10979|11365|FASTA Dump}} | |||
|- class="tableEdit_footer" | |||
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162470.O49edfca3de243&page=162470&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_location_table edit table]</span> || || || || | |||
|} | |||
<!--box uid=421aa90e079fa326b6494f812ad13e79.162470.O49edfca3de243--></protect> | |||
</protect> | </protect> | ||
===Notes=== | ===Notes=== | ||
==Sequence Features== | ==Sequence Features== | ||
{{BacktoTop}} | {{BacktoTop}} | ||
{{{ | <protect><!--box uid=421aa90e079fa326b6494f812ad13e79.162470.F49edfca3e8534--> | ||
<!-- | |||
****************************************************************************************** | |||
* | |||
* ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. ** | |||
* | |||
****************************************************************************************** -->{{Gene_sequence_features_help}} | |||
{| id="F49edfca3e8534" class=" tableEdit Gene_sequence_features_table" | |||
|- {{table_heading_style}} | |||
!|Feature Type!!Strain!!Genomic Location!!Evidence!!Reference!!Notes | |||
|- class="tableEdit_footer" | |||
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162470.F49edfca3e8534&page=162470&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_sequence_features_table edit table]</span> || || || || || | |||
|} | |||
<!--box uid=421aa90e079fa326b6494f812ad13e79.162470.F49edfca3e8534--></protect> | |||
<protect><!--Sequence_notes--></protect> | <protect><!--Sequence_notes--></protect> | ||
====Notes==== | ====Notes==== | ||
==Alleles and Phenotypes== | ==Alleles and Phenotypes== | ||
{{BacktoTop}} | {{BacktoTop}} | ||
{{{ | <protect><!--box uid=421aa90e079fa326b6494f812ad13e79.162470.D49edfca3eb40e--> | ||
<!-- | |||
****************************************************************************************** | |||
* | |||
* ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. ** | |||
* | |||
****************************************************************************************** -->{{Gene_alleles_help}} | |||
{| id="D49edfca3eb40e" class=" tableEdit Gene_allele_table dataTable" | |||
|- {{table_heading_style}} | |||
!|Allele!!Nt change(s)!!AA change(s)!!Phenotype: Type!!Phenotype: Description!!Reference!!Availability!!Comments | |||
|- class="tableEdit_footer" | |||
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162470.D49edfca3eb40e&page=162470&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_allele_table edit table]</span> || || || || || || || | |||
|} | |||
<!--box uid=421aa90e079fa326b6494f812ad13e79.162470.D49edfca3eb40e--></protect> | |||
<protect><!--Alleles_notes--></protect> | <protect><!--Alleles_notes--></protect> | ||
===Notes=== | ===Notes=== | ||
{{{ | |||
==Genetic Interactions== | |||
{{BacktoTop}} | |||
<protect><!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.162470.O4e04b2e90a58a--> | |||
<!-- | |||
****************************************************************************************** | |||
* | |||
* ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. ** | |||
* | |||
****************************************************************************************** -->{{Genetic_interaction_help}} | |||
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="O4e04b2e90a58a" class=" tableEdit Genetic_interaction_table dataTable" | |||
|- {{table_heading_style}} | |||
!|Interactor!!Interaction!!Allele!!Score(s)!!Reference(s)!!Accessions!!Notes | |||
|- class="tableEdit_footer" | |||
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.162470.O4e04b2e90a58a&page=162470&pagename={{FULLPAGENAMEE}}&type=0&template=Genetic_interaction_table edit table]</span> || || || || || || | |||
|} | |||
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.162470.O4e04b2e90a58a--></protect> | |||
<!-- Genetic Interacdtions Notes --> | |||
===Notes=== | |||
==Genetic Resources== | ==Genetic Resources== | ||
{{BacktoTop}} | {{BacktoTop}} | ||
{{{ | <protect><!--box uid=421aa90e079fa326b6494f812ad13e79.162470.O49edfca3ee031--> | ||
<!-- | |||
****************************************************************************************** | |||
* | |||
* ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. ** | |||
* | |||
****************************************************************************************** -->{{Gene_resources_help}} | |||
{| id="O49edfca3ee031" class=" tableEdit Gene_resource_table" | |||
|- {{table_heading_style}} | |||
!|Resource!!Resource Type!!Source!!Notes/Reference | |||
|- class="tableEdit_footer" | |||
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162470.O49edfca3ee031&page=162470&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_resource_table edit table]</span> || || || | |||
|} | |||
<!--box uid=421aa90e079fa326b6494f812ad13e79.162470.O49edfca3ee031--></protect> | |||
<protect><!--Gene_resources_notes--></protect> | <protect><!--Gene_resources_notes--></protect> | ||
===Notes=== | ===Notes=== | ||
==Accessions in Other Databases== | ==Accessions in Other Databases== | ||
{{BacktoTop}} | {{BacktoTop}} | ||
{{{ | <protect><!--box uid=421aa90e079fa326b6494f812ad13e79.162470.G49edfca3f1479--> | ||
<!-- | |||
****************************************************************************************** | |||
* | |||
* ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. ** | |||
* | |||
****************************************************************************************** -->{{Gene_accessions_help}} | |||
{| id="G49edfca3f1479" class=" tableEdit Gene_accessions_table" | |||
|- {{table_heading_style}} | |||
!|Database!!Accession!!Notes | |||
|- | |||
| | |||
[http://www.ncbi.nlm.nih.gov/ NCBI] ([[NCBI|EcoliWiki Page]]) | |||
| | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&cmd=Retrieve&dopt=full_report&list_uids=2636265 GeneID:2636265] | |||
| | |||
|- class="tableEdit_footer" | |||
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162470.G49edfca3f1479&page=162470&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_accessions_table edit table]</span> || || | |||
|} | |||
<!--box uid=421aa90e079fa326b6494f812ad13e79.162470.G49edfca3f1479--></protect> | |||
<protect><!--Gene_accessions_notes--></protect> | <protect><!--Gene_accessions_notes--></protect> | ||
===Notes=== | ===Notes=== | ||
==Links== | ==Links== | ||
{{BacktoTop}} | {{BacktoTop}} | ||
{{{ | <protect><!--box uid=421aa90e079fa326b6494f812ad13e79.162470.U49edfca406b56--> | ||
<!-- | |||
****************************************************************************************** | |||
* | |||
* ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. ** | |||
* | |||
****************************************************************************************** --> | |||
{| id="U49edfca406b56" class=" tableEdit Links_table" | |||
|- {{table_heading_style}} | |||
!|Name!!URL!!Comments | |||
|- class="tableEdit_footer" | |||
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162470.U49edfca406b56&page=162470&pagename={{FULLPAGENAMEE}}&type=0&template=Links_table edit table]</span> || || | |||
|} | |||
<!--box uid=421aa90e079fa326b6494f812ad13e79.162470.U49edfca406b56--></protect> | |||
==References== | ==References== | ||
{{BacktoTop}} | {{BacktoTop}} | ||
{{RefHelp}} | {{RefHelp}} | ||
<references/> | <references /> | ||
===Categories=== | ===Categories=== | ||
[[Category:Gene List:Phage_Mu]] | |||
Latest revision as of 20:56, 19 September 2013
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| Nomenclature | Location(s) and DNA Sequence | Sequence Features | Alleles and Phenotypes | Genetic Interactions | Genetic Resources | Accessions | Links | References | Suggestions |
Nomenclature
<protect>
See Help:Gene_nomenclature for help with entering information in the Gene Nomenclature table.
| Standard name |
orf2 |
|---|---|
| Mnemonic | |
| Synonyms |
Phage_Mu_orf2, Phage_Mu_23 |
| edit table |
</protect>
Notes
Location(s) and DNA Sequence
<protect> See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.
| Strain | Map location | Genome coordinates | Genome browsers | Sequence links |
|---|---|---|---|---|
|
NC_000929: 10207..12137 |
||||
| edit table |
</protect>
Notes
Sequence Features
See Help:Gene_sequence_features for help in entering sequence features in EcoliWiki.
| Feature Type | Strain | Genomic Location | Evidence | Reference | Notes |
|---|---|---|---|---|---|
| edit table |
Notes
Alleles and Phenotypes
See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki.
| Allele | Nt change(s) | AA change(s) | Phenotype: Type | Phenotype: Description | Reference | Availability | Comments |
|---|---|---|---|---|---|---|---|
| edit table |
Notes
Genetic Interactions
| Interactor | Interaction | Allele | Score(s) | Reference(s) | Accessions | Notes |
|---|---|---|---|---|---|---|
| edit table |
Notes
Genetic Resources
See Help:Gene_resources for help entering information into the Genetic Resources table.
| Resource | Resource Type | Source | Notes/Reference |
|---|---|---|---|
| edit table |
Notes
Accessions in Other Databases
See Help:Gene_accessions for help with entering information into the Gene Accessions table.
| Database | Accession | Notes |
|---|---|---|
|
| ||
| edit table |
Notes
Links
| Name | URL | Comments |
|---|---|---|
| edit table |
References
See Help:References for how to manage references in EcoliWiki.