torD:Quickview: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older edit
imported>WikiEntryBot
Automated import of articles
touch
 
(18 intermediate revisions by 3 users not shown)
Line 1: Line 1:
<!--PLEASE EDIT FROM THE SECTION OR TABLE EDIT LINKS...IF YOU SEE THIS MESSAGE, YOU'RE PROBABLY IN THE WRONG PLACE-->
<!--
***************************************************************************************************************************************************
*
*
*              PLEASE EDIT FROM THE SECTION OR TABLE EDIT LINKS...IF YOU SEE THIS MESSAGE,
*                            YOU'RE PROBABLY IN THE WRONG PLACE
*
*
***************************************************************************************************************************************************
-->{{#css:Suppresslinks.css}}<css>{{:Suppresslinks.css}}</css>
<noinclude>{{TabsTop}}   
<noinclude>{{TabsTop}}   
{{Tab On|Quickview|torD}}{{Tab|Gene|torD}}{{Tab|Gene Product(s)|torD}}{{Tab|Expression|torD}}{{Tab|Evolution|torD}}{{Tab|On One Page|torD}}{{TabsBottom}}
{{Tab On|Quickview|torD}}{{Tab|Gene|torD}}{{Tab|Gene Product(s)|torD}}{{Tab|Expression|torD}}{{Tab|Evolution|torD}}{{Tab|On One Page|torD}}{{TabsBottom}}
Line 8: Line 17:
|}
|}
</noinclude>
</noinclude>
<!--box uid=421aa90e079fa326b6494f812ad13e79..Z469f901842621-->
<protect><!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.3741.V49b026e9c8bb2-->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. *** -->
<!--
{|{{Prettytable}}
******************************************************************************************
*
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
*
****************************************************************************************** -->
{|   id="V49b026e9c8bb2"  class=" tableEdit New_Quickview_Table" 
 
|-
|-
!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
|
||
[[torD:Gene|''torD]]'' (synonyms: ''ECK0989, b0998, JW0983'')<ref name='LIB:Riley_2006'/>
''torD''
|-
|-
!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
|
||
[[torD:Gene_Product(s)|TorD product]]<ref name='LIB:Riley_2006'/>: chaperone involved in maturation of TorA subunit of trimethylamine N-oxide reductase system I<ref name='LIB:Riley_2006'/>, B0998<ref name='LIB:EcoCyc10.6'/>, TorD<ref name='LIB:EcoCyc10.6'/>
''ECK0989, b0998, JW0983''<ref name='LIB:Riley_2006'/>, JW0983''
|-
|-
!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
|
||
chaperone protein for trimethylamine-N-oxide oxidoreductase I<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
chaperone protein for trimethylamine-N-oxide oxidoreductase I<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


 
Redox enzyme maturation protein (REMP) for TorA; cytoplasmic chaperone for TorA activation; protects TorA TAT signal peptide from degradation<ref name='LIB:EcoGene'/>
|-
!align=left {{table_heading_style}} |Product Synonyms(s)
||
''chaperone involved in maturation of TorA subunit of trimethylamine N-oxide reductase system I<ref name='LIB:Riley_2006'/>, B0998<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TorD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0989, JW0983, b0998''
|-
!align=left {{table_heading_style}} |Function from GO
||
<GO_nr />
|-
|-
!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
|
||


|-
|-
!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
|
||
transcription unit(s): [[:Category:txn_units:torCAD|torCAD]]<ref name='LIB:EcoCyc10.6'/>, OP00297, tor  
transcription unit(s): [[:Category:Txn_unit:torCAD|torCAD]]<ref name='LIB:EcoCyc10.6'/>, OP00297, tor  
|-
|-
!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
|
||


|-
|-
|colspan='2'|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79..Z469f901842621&page=&pagename={{FULLPAGENAMEE}} edit table]
!align=left {{table_heading_style}} |Quick Links
||
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=torD&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG12195]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002084&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=torD&loc=MG1655%3A1061022..1061621,W3110%3A1062221..1062820,DH10B%3A1114950..1115549,REL606%3A1078089..1078688,BW2952%3A963990..964589]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=963990&end=964589&gene=torD&aa=mttltaqqiacvyawlaqlfsrelddeqltqiasaqmaewfsllkseppltaavnelenriatltvrddarlelaadfcglflmtdkqaalpyasaykqdeqeikrllveagmetsgnfnepadhlaiylellshlhfslgegtvparridslrqktltalwqwlpefvarcrqydsfgfyaalsqlllvlvecdhqnr]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=torD+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=torD]]&nbsp;&nbsp;
 
|- class="tableEdit_footer"
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.3741.V49b026e9c8bb2&page=3741&pagename={{FULLPAGENAMEE}}&type=1&template=New_Quickview_Table edit table]</span> ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79..Z469f901842621-->
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.3741.V49b026e9c8bb2--></protect>
{{Quickview_table_help}}
<protect><!--Quickview_notes--></protect>
<protect><!--Quickview_notes--></protect>
==Notes==
===Notes===
{{BacktoTop}}
 
TorD prepares the molybdoenzyme TorA for MGD cofactor insertion, independent of signal peptide binding. torD, dmsD and ycdY are paralogs. Overexpressed YdcY and DmsD interfere with apoTorA maturation by TorD, independent of the TorA signal peptide (Ilbert, 2004). Bifunctional TorD acts in MGD insertion and TorA export proof-reading, a step that insures only mature protein is exported.<ref name='LIB:EcoGene'/>
 




<noinclude>
<noinclude>
==References==
==References==
{{BacktoTop}}
<references/>
<references/>
</noinclude>
</noinclude>

Latest revision as of 21:55, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

torD

Gene Synonym(s)

ECK0989, b0998, JW0983[1], JW0983

Product Desc.

chaperone protein for trimethylamine-N-oxide oxidoreductase I[2][3]

Redox enzyme maturation protein (REMP) for TorA; cytoplasmic chaperone for TorA activation; protects TorA TAT signal peptide from degradation[4]

Product Synonyms(s)

chaperone involved in maturation of TorA subunit of trimethylamine N-oxide reductase system I[1], B0998[2][1], TorD[2][1] , ECK0989, JW0983, b0998

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): torCAD[2], OP00297, tor

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


TorD prepares the molybdoenzyme TorA for MGD cofactor insertion, independent of signal peptide binding. torD, dmsD and ycdY are paralogs. Overexpressed YdcY and DmsD interfere with apoTorA maturation by TorD, independent of the TorA signal peptide (Ilbert, 2004). Bifunctional TorD acts in MGD insertion and TorA export proof-reading, a step that insures only mature protein is exported.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=torD:Quickview&oldid=1398545"