rpsA:Quickview: Difference between revisions

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{{Tab On|Quickview|rpsA}}{{Tab|Gene|rpsA}}{{Tab|Gene Product(s)|rpsA}}{{Tab|Expression|rpsA}}{{Tab|Evolution|rpsA}}{{Tab|On One Page|rpsA}}{{TabsBottom}}
{{Tab On|Quickview|rpsA}}{{Tab|Gene|rpsA}}{{Tab|Gene Product(s)|rpsA}}{{Tab|Expression|rpsA}}{{Tab|Evolution|rpsA}}{{Tab|On One Page|rpsA}}{{TabsBottom}}
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[rpsA:Gene|''rpsA]]'' (synonyms: ''ECK0902, b0911, JW0894, ssyF, rps'')<ref name='LIB:Riley_2006'/>
''rpsA''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[rpsA:Gene_Product(s)|RpsA product]]<ref name='LIB:Riley_2006'/>: 30S ribosomal subunit protein S1<ref name='LIB:Riley_2006'/>, SsyF<ref name='LIB:EcoCyc10.6'/>, B0911<ref name='LIB:EcoCyc10.6'/>, RpsA<ref name='LIB:EcoCyc10.6'/>, [[:Category:Complex:30S ribosomal subunit|30S ribosomal subunit]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Complex:ribosome|ribosome]]<ref name='LIB:EcoCyc10.6'/>
''ECK0902, b0911, JW0894, ssyF, rps''<ref name='LIB:Riley_2006'/>
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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30S ribosomal subunit protein S1<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
30S ribosomal subunit protein S1<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:30S ribosomal subunit|30S ribosomal subunit]]<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; [[:Category:Complex:ribosome|ribosome]]<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


30S ribosomal subunit protein S1; subunit of RNA phage Qbeta replicase; binds and stimulates RNAP<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''30S ribosomal subunit protein S1<ref name='LIB:Riley_2006'/>, SsyF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B0911<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RpsA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0902, JW0894, ssyF, b0911''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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|-
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:txn_units:rpsA-ihfB|rpsA-ihfB]]<ref name='LIB:EcoCyc10.6'/>, rpsA-himD, [[:Category:txn_units:cmk-rpsA|cmk-rpsA]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:rpsA-ihfB|rpsA-ihfB]]<ref name='LIB:EcoCyc10.6'/>, rpsA-himD, [[:Category:Txn_unit:cmk-rpsA|cmk-rpsA]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=rpsA&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10900]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000891&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=rpsA&loc=MG1655%3A961218..962891,W3110%3A962417..964090,DH10B%3A1015146..1016819,REL606%3A979087..980760,BW2952%3A864186..865859]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=864186&end=865859&gene=rpsA&aa=mtesfaqlfeeslkeietrpgsivrgvvvaidkdvvlvdaglksesaipaeqfknaqgeleiqvgdevdvaldavedgfgetllsrekakrheawitlekayedaetvtgvingkvkggftvelngiraflpgslvdvrpvrdtlhlegkelefkvikldqkrnnvvvsrraviesensaerdqllenlqegmevkgivknltdygafvdlggvdgllhitdmawkrvkhpseivnvgdeitvkvlkfdrertrvslglkqlgedpwvaiakrypegtkltgrvtnltdygcfveieegveglvhvsemdwtnknihpskvvnvgdvvevmvldideerrrislglkqckanpwqqfaethnkgdrvegkiksitdfgifigldggidglvhlsdiswnvageeavreykkgdeiaavvlqvdaererislgvkqlaedpfnnwvalnkkgaivtgkvtavdakgatveladgvegylraseasrdrvedatlvlsvgdeveakftgvdrknraislsvrakdeadekdaiatvnkqedanfsnnamaeafkaakge]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rpsA+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=rpsA]]&nbsp;&nbsp;
 
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==Notes==
===Notes===
{{BacktoTop}}
 
HT_Cmplx22_Cyt: DnaK+GrpE+GyrA+RpsA. HT_Cmplx30_Mem: ClpB+DnaK+InfB+RpsA.<ref name='LIB:EcoGene'/>
 




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==References==
==References==
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Latest revision as of 21:46, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

rpsA

Gene Synonym(s)

ECK0902, b0911, JW0894, ssyF, rps[1]

Product Desc.

30S ribosomal subunit protein S1[2][3];

Component of 30S ribosomal subunit[2][3]; ribosome[2][3]

30S ribosomal subunit protein S1; subunit of RNA phage Qbeta replicase; binds and stimulates RNAP[4]

Product Synonyms(s)

30S ribosomal subunit protein S1[1], SsyF[2][1], B0911[2][1], RpsA[2][1] , ECK0902, JW0894, ssyF, b0911

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): rpsA-ihfB[2], rpsA-himD, cmk-rpsA[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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HT_Cmplx22_Cyt: DnaK+GrpE+GyrA+RpsA. HT_Cmplx30_Mem: ClpB+DnaK+InfB+RpsA.[4]



References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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